| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1851 |
|---|
| Symbol | |
|---|
| ID | 6987420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 1986310 |
|---|
| End bp | 1987194 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643380150 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002263247 |
|---|
| Protein GI | 209695318 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.824174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCACG TTTCATCATT TATCACCAAT AGGATCATCA TGCTTTCAAT CACTCATCGC
TTTATTTTAC TTGTTCTAGT AAGCCTTTCA CTTACCGGAT GCTTTGGGAT AAAACCGACA
ACAGAACAAT TATGCGAAGA ACATGGCGCT TTACAATGTC AAGAACTCAA TATGCGTGAT
GGACAATGCC GCCATCAAAG AGATGAATTA ATTTTAAACC GTTTTGATGT ACTAAAAACC
AATTCGGATC TTGATAAATT AAAAACCTTA CAGGCCACAT TAAAATACCA AACCTGTTTA
GGCTCTGCTG CACAAATTGA ACCAATCACA GCAAAAGAAA TTAAATCAAA ACGTACCGAA
GCTTTACTTC ATACGTATGA TGCCTCGGAT GCACTTTCGG AAGAATTAAA AAGCTCTACA
GACCCTAAAG TTCTCTTTTA TCGCTGGACT GTGGGCGACA AAGAGGCATT ACGATCTTTT
TTACAATTAG AAAATACAAA AGAATTAGAA ACGGCCGAGT TACAATATGC ATTAGCCACC
TTTTATACTC TTCGAAATGA GAATAAAACA ATTCAGTTAC TTAACCATTC TTTAGAACTG
CTCACAGAAC AAGACTATAA AAATCAATTT CATTCGATCA TCATTAACTC ACTAGCAAGT
GTGAACTATA AAGCAGGCAA TAAAGAGCAC GCTTATATCT GGACGATGGT AGGAAAAGCA
TTTGACTTAC AAGTGGCCTC CGAACAGCAA TTAAAGCTAC TTTATCATTT TCCAGAAGAG
ACAAAACAAG AGTTACTGAT TACATCAGAA ATGATTAAAG ACAGCATTAA AGCGCAAAAT
TTTACCGTTT CAATGCTTCC GACAATAAAT AACGACTCAC AGTAA
|
|---|
| Protein sequence | MDHVSSFITN RIIMLSITHR FILLVLVSLS LTGCFGIKPT TEQLCEEHGA LQCQELNMRD
GQCRHQRDEL ILNRFDVLKT NSDLDKLKTL QATLKYQTCL GSAAQIEPIT AKEIKSKRTE
ALLHTYDASD ALSEELKSST DPKVLFYRWT VGDKEALRSF LQLENTKELE TAELQYALAT
FYTLRNENKT IQLLNHSLEL LTEQDYKNQF HSIIINSLAS VNYKAGNKEH AYIWTMVGKA
FDLQVASEQQ LKLLYHFPEE TKQELLITSE MIKDSIKAQN FTVSMLPTIN NDSQ
|
|---|
| |