Gene VSAL_I1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1850 
Symbol 
ID6988583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp1985842 
End bp1986246 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content39% 
IMG OID643380149 
Productmethionine sulfoxide reductase B 
Protein accessionYP_002263246 
Protein GI209695317 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.510559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAT CAAAATCATT TTCTGACTTT ACAAACGAAG ATTGGAAAAG TGAGTTAACC 
GACGAAGAAT TTGTGGTTTG TCGACAAAAA GGCACAGAAG CGCCTTTTTC AGGAAAGCTT 
TTACAGAATA AGGCGACAGG GAATTATGCG TGTACCTGTT GTCATGTGGA TTTGTTTTCA 
TCAGAGAATA AATACGATTC TGGTTGTGGA TGGCCAAGCT TTGATGAACC ATTAAATACG 
CAGGTTATTC GATATATAAA AGACAATAGC CATGGCATGG CGCGAGTAGA GATTCGATGT 
GCCCGCTGTG ATAGTCATTT AGGGCATGTA TTTAATGATG GTCCTAAAAC GACCGGAGAG 
CGTTTTTGTG TTAACTCTAT TTCTCTACGC TTTAAAGGTA AATAA
 
Protein sequence
MNQSKSFSDF TNEDWKSELT DEEFVVCRQK GTEAPFSGKL LQNKATGNYA CTCCHVDLFS 
SENKYDSGCG WPSFDEPLNT QVIRYIKDNS HGMARVEIRC ARCDSHLGHV FNDGPKTTGE 
RFCVNSISLR FKGK