| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1797 |
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| Symbol | |
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| ID | 6987378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1919516 |
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| End bp | 1921201 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380104 |
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| Product | mechanosensitive ion channel |
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| Protein accession | YP_002263201 |
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| Protein GI | 209695272 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.433096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTATT TACTTTGTTT TCTTCTTTTA TTTTCATCCC TTACCTATGC CAATGAAACT
CAAGACATCG AGCAATTACA AAATATTAAT GCTGAAATTG CACGACTAAA GCAAGAGTCT
GCCTCATTCA AAGGCAATGA CTTAGCGGTT ATTCGCGTAC AGCAAGTAGA AAAAAACAAT
GAACTCAGAA TCGTTCTGTC TGAGTTAATC AACAAGCACA CCGCAGAAAA TACGCCACTG
TTGGTGAGTG AAGTTGAAGA TCAAATTCGT TATGCTGATC GTTCTTTTCT CTATTTAGGC
AAAGAGCTAA AATCAAAAAA AGATAAAATA GATACGGCGG ATGTCGAGCA TAAACTCGCT
TTACAAAACA CATTAAATGA ATCAAGAAGT TATTATTACA CTTCCCTCTC AGATCAACTT
CAAAATTACC GCTGGTTAAA CAAACTCGGC AAACCAAACC AAGCAAAAGT CGATGCATTC
AAGTTAGTTA TCGACCAAAA AATTAAGTTT CTGTCTGCCT CTTTGAGTTT TGATTCAAGC
AGAGAACAGC TATTAGCGGA TCAACTTCAG CGTTCGTCTG ATTCAGAGAA ATCCTCTCTG
ACCTTAGAGC ACCTCTTCTT TCAAAGAAAA GTGACCAACT CAACGGATGG GTTAATTAAA
CTGATTAACA TTGCTGACCA ATTAAATATC AGCACGACAA ACTACAAACG TCAGGTCTTT
GCCACTACGG GCAATTTAAC AGAAGATATT TTAAGTTTTC CCGTGATGGC AGCGATTTTA
AGTAATTGGA TCACCGACGG CAGTAACTGG TTATTCAAAC ACGCACCTGA TCAGCTCTTA
AAATTCTTTG TCTTTATCTT AATCATTTTT GCCACTCGTT TATTAGCAAG GCTGACTCGA
CGTGTGGTAC TCAAAGCCGT TGTTCAACCT CATTTACGTA TGAGTAAATT GATGCAAGAT
TTCTTTGTTT CGATGTCGAG TAAACTGATT TTCTTCATTG GTATTCTCAT TGCCTTTTCT
AAAATTGGGT TGGATTTGGC TCCGGTTCTC ACCGGTTTCG GTGTTGCTGG TATTATTATT
GGTTTTGCAT TGCAAGATAC GCTATCCAAC TTTGCATCAG GCATGATGCT GCTAATTTAT
CGCCCGTTTG ATGTGGGTGA TTTAGTGGAT GCAGGGGGCG TATCAGGAAA AGTGAGCCAC
ATGAGTTTAG TAAACACCAC GATTAAAACG TTTGATAACC AAATTATCAT CTTACCCAAC
AGTAAAATTT GGGGAGACGT AATAAAAAAC GTAACTCACG AACGATTACG CCGTGTCGAT
ATGGTGTTTG GCATTGGCTA CGAAGACAGC ATCGAACACG CTGAAAAAAT CTTAGCCGAA
ATTATTGATA CTCACCCTGC GGCCTTAAAA AAACCAGAGC CCAATATTCG AGTACATACT
CTTGGTGCCT CATCGGTTGA TTTTATTGTA CGACCTTGGG TAAAAACCGA AGATTATTGG
GATGTGTATT GGGATGTGAC TCGTGAAGTG AAATTACGCT TTGATAAAGA AGGGATCTCG
ATTCCTTTTG CTCAACAAGA TGTGCATGTA CATTTTGCTA AAAAAGCGAA GAAACCAAAA
GCAACAACAG GGATAGCGGG AAAACTGAGT AACGTCATTG ACTCTGTTCG ATCAAAAGAC
AGCTAA
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| Protein sequence | MRYLLCFLLL FSSLTYANET QDIEQLQNIN AEIARLKQES ASFKGNDLAV IRVQQVEKNN
ELRIVLSELI NKHTAENTPL LVSEVEDQIR YADRSFLYLG KELKSKKDKI DTADVEHKLA
LQNTLNESRS YYYTSLSDQL QNYRWLNKLG KPNQAKVDAF KLVIDQKIKF LSASLSFDSS
REQLLADQLQ RSSDSEKSSL TLEHLFFQRK VTNSTDGLIK LINIADQLNI STTNYKRQVF
ATTGNLTEDI LSFPVMAAIL SNWITDGSNW LFKHAPDQLL KFFVFILIIF ATRLLARLTR
RVVLKAVVQP HLRMSKLMQD FFVSMSSKLI FFIGILIAFS KIGLDLAPVL TGFGVAGIII
GFALQDTLSN FASGMMLLIY RPFDVGDLVD AGGVSGKVSH MSLVNTTIKT FDNQIIILPN
SKIWGDVIKN VTHERLRRVD MVFGIGYEDS IEHAEKILAE IIDTHPAALK KPEPNIRVHT
LGASSVDFIV RPWVKTEDYW DVYWDVTREV KLRFDKEGIS IPFAQQDVHV HFAKKAKKPK
ATTGIAGKLS NVIDSVRSKD S
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