Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1761 |
Symbol | |
ID | 6989295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1873744 |
End bp | 1874490 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643380070 |
Product | putative sporulation-control protein |
Protein accession | YP_002263169 |
Protein GI | 209695240 |
COG category | [R] General function prediction only |
COG ID | [COG4326] Sporulation control protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0034341 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAGA AATTAAAGGC GTCATTAGGT ATAGGTGCCG CAAAGGTAGA TACCATTTTA GAAAACCCTG AATTGTTCCA AGGTGATACG TTAATAGGTA CGGTTCATAT TCAAGGGGGA GATATTGAGC AAAAAATTGA TGCAATCCAT TTGAAGCTGA ATACTGAAAT CAAAGTAGAA AATGACAATG GAACTAGCTA TCAAACATTA ACTCTGTTTC ATACTCAAGC CGTGAATCCA TTTGTGATTC AAGCTGGGGA GACTCAGGAA ATGAAATTTA CAATTAAGTT ACCAGATGAA ACTCCGATTA CAGCGCTTAA TGTGAACAAT AACCATTGTG ATGTTTGGGT TGAAACCGTA TTAGATATTG ATTTTGCTAT TGATCCTACG GATCGTGATT TATTAGTTGT TAAGCCAATG CGAGTTGCTG CTGCTATTAT CAGCCAAATC GAACAGGCTG GGCTTAGTAT GGTAAAAGCG GATGTAGAAC AGGGGTTCCT AAATGGAGGG CACTTTAAGT CACATTCTGG TGGCTACCAA GAGATCGAAT TTAAAAGTAA TGGTTTCATC AACAAGAAAG AAATAGAACT ATCATTTGTT CTGGATGGTC AAGTTCTTCA CTGTTTAGCT GAAGAGGATC GTTCGATGGG CTTTAATCGT GGTGACCAAT ATGCTTCTTT TTCATTAAAC GTCAATGCGT CAAGTGCTGA TATCCATCAT GCTGTACAAA AGATATTACG TGTGTAG
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Protein sequence | MFKKLKASLG IGAAKVDTIL ENPELFQGDT LIGTVHIQGG DIEQKIDAIH LKLNTEIKVE NDNGTSYQTL TLFHTQAVNP FVIQAGETQE MKFTIKLPDE TPITALNVNN NHCDVWVETV LDIDFAIDPT DRDLLVVKPM RVAAAIISQI EQAGLSMVKA DVEQGFLNGG HFKSHSGGYQ EIEFKSNGFI NKKEIELSFV LDGQVLHCLA EEDRSMGFNR GDQYASFSLN VNASSADIHH AVQKILRV
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