| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1729 |
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| Symbol | |
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| ID | 6987334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1840008 |
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| End bp | 1841789 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380044 |
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| Product | oligopeptidase F |
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| Protein accession | YP_002263143 |
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| Protein GI | 209695214 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0341754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCTC CTAGCTGGGA TCTTTCCGTT GCTTTTGAAT CATTAAATGA TCCAAAATTA
GATGCGACAA TCATTACTAT TGAACAAAAA ATAAAGACGC TTTTCAGTTC GACTGCTGAA
TTACATGCTA GTGCATTACA ACAAGCGATT TTAGACAGAG AATCCATTTC AGTGTTACTT
GCAACAGTGG CGAGTTATGG TAATTGTATT GCTTCTGTTG ATGCGTCTGA TAACCAAGCA
AAAGCGCTTG TGAATAAGAT GAATAAATTG TCATCCGAAT TATCACAAGC TTTTAGCCCT
TATCTTGATG CGATAGTGAA TTCACCAACC GCTTTATTTG AAGAGGTTCT ATCATACAGT
GAAGAATTAG AAGCCCAACG TTTCTTATTA GAAGAAGAAA GGAAGCTTAT TGCGACACGT
TTGAGTGTTA AAGAAGAGCA GCTTCTCTCT GCTATGAGTG TTGATGGTAA AAATGCATGG
GGCCGTTTAT ACGATAATAT TACCGGTTCT ATGACCGTGA CGTTAGCGCT GTCTAATGGA
GAGCAAGAAA CCATTGGTTT ATCGCAAGCT GCAAGTATTT TATACGGAAG TGATGAAAAC
CGTAGAGAAC CAGCATGGCG AGCAATTCAA TTAGCAATGA AACAAAATCA AGAGAGTTTG
TCTGCCATTT TAAATGCGTT ATCGGGGTGG CGGTTAGCTG AATATGAAAA ACGAAGCGCA
ACAGCGTCAG TACATTTTTT GGAGTCAAGT TTACATGGTA GCCGTATAGA ACAAGCAACA
TTAGATAGCA TGATGTCAGT AGCAAAGAAA AATCGTGCTG TAGGACAAAA AGCGGCACGT
TTAATGGCTA AAATGTTTGG TACTGAGAAG CTAACACCTT GGGATCAACT TGCTTCAATG
CCTCCATTGA GTGGAAGTGC TTCTACTTAT TCTTTTGATG AAGCGATAGA TATCATTAAA
GAGGCATTTG GCAGCGTATC TCAAGAAATG GCCGATTTTG TGGCTCTGAT GGTAACTAAT
GGTTGGATCG ATGCAGCACC GCAATCGACT AAACGTCTTA GTGCGTATTG TACTAAGTTT
GCAGATTCGC GCACACCTCT AGTCTTTATG ACGTGGGGTG ACAGTATGTC GGATGTATTA
ACGCTTGCTC ATGAATTAGG TCATGCATTC CATAATTGGG TAATGCGAGA CATGCCTTTA
TGTAAAACAA AGTACCCAAT GACATTAGCG GAAACCGCCT CTATTTTTGC AGAAAATGCA
GTTCGTGATG CGTTATTGGC AAAGGCGAAA ACAAAAGAAG ATAAAATAGA AATGTTATGG
GAGGAGTTAT CTTCCGCTTT AGCATTAACG ATAAATATTC CAGTACGTTA TGAATTTGAA
AAATCATTTT ATGAACAACG CTCAACTCAG GAGTTAGGGC CAGAGCAACT GTCAGAGTTA
ATGAGTAAAA CGTGGAATGA TTGGTATGGT GATTCAATGT CAGAACCTGA TTCATTATTC
TGGGCAAGTA AATTACATTT CAGCATTCCT GAGGTGAGTT TTTATAATTA CCCGTATTTA
TTTGGTTATC TATTTAGCAT CGGTGTATAC GCACAACGAG AAGCAAAAGG GGATAGCTTT
TATCGTGATT ATGTTAATTT ATTGCGTGAT ACTGGCTCAA TGCGTGCAGA AGACGTCGTG
AATAAGCATT TGCAAATGGA TTTAACGAAA GAGTTTTTTT GGCAGCAGAG TTTGGATAGG
GTAAGTAAAC AAATTGATGA ATTTGAGCGA TTGATTGGAT AG
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| Protein sequence | MTAPSWDLSV AFESLNDPKL DATIITIEQK IKTLFSSTAE LHASALQQAI LDRESISVLL
ATVASYGNCI ASVDASDNQA KALVNKMNKL SSELSQAFSP YLDAIVNSPT ALFEEVLSYS
EELEAQRFLL EEERKLIATR LSVKEEQLLS AMSVDGKNAW GRLYDNITGS MTVTLALSNG
EQETIGLSQA ASILYGSDEN RREPAWRAIQ LAMKQNQESL SAILNALSGW RLAEYEKRSA
TASVHFLESS LHGSRIEQAT LDSMMSVAKK NRAVGQKAAR LMAKMFGTEK LTPWDQLASM
PPLSGSASTY SFDEAIDIIK EAFGSVSQEM ADFVALMVTN GWIDAAPQST KRLSAYCTKF
ADSRTPLVFM TWGDSMSDVL TLAHELGHAF HNWVMRDMPL CKTKYPMTLA ETASIFAENA
VRDALLAKAK TKEDKIEMLW EELSSALALT INIPVRYEFE KSFYEQRSTQ ELGPEQLSEL
MSKTWNDWYG DSMSEPDSLF WASKLHFSIP EVSFYNYPYL FGYLFSIGVY AQREAKGDSF
YRDYVNLLRD TGSMRAEDVV NKHLQMDLTK EFFWQQSLDR VSKQIDEFER LIG
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