| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1713 |
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| Symbol | glpT |
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| ID | 6988601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1823160 |
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| End bp | 1824611 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643380031 |
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| Product | sn-glycerol-3-phosphate transporter |
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| Protein accession | YP_002263131 |
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| Protein GI | 209695202 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00712] glycerol-3-phosphate transporter
[TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCATCA CTTTCGAACG AAATGTTTTA TTTGATTGTT CGAGCTTTAT GTTGTTCACC
ATCGCAAATA TAATAACGGA GTTAACTATG TTTGGTATAT TTAAACCCCA AGCGCATATA
GCACGCCTCG CTTCTAATCA GATAGATGGC ACCTATACTC GCTTACGTTG GCAATTGTTC
CTCAGTATTT TCGTCGGTTA TGCCGGTTAC TACCTAGTTC GTAAGAACTT CAGTTTAGCA
ATGCCTTATT TGATTGACCA AGGTTTTAGC CGTGGGGATC TTGGTGTTGC TTTAGCGGCG
GTATCTATTG CTTATGGGCT GTCAAAGTTC TTAATGGGCA GTGTGTCTGA CCGTTCTAAT
CCTCGATATT TTCTCAGTGC GGGCTTATTG ATGTCTGCCG CTGTTATGTT CTGCTTTGGT
TTTATGCCTT GGGCGACAAA CAGTATTACG GCAATGTTCA TTTTATTATT CTTGAACGGT
TGGTTTCAAG GCATGGGGTG GCCTGCATGC GGTCGAACGA TGGTGCATTG GTGGTCACGT
AAAGAACGTG GTGAACTGGT TTCGGTTTGG AACGTTGCAC ACAATGTGGG GGGCGGGTTA
ATTGGTCCTC TTTTCTTATT GGGCCTTTGG GCATTTAACG ACGATTGGCG CTCAGCATTT
TATGTACCAG CCATTTTTGC CACGTTAGTT GCTGTTTTCA TTTGGGCTAC ATTGCGTGAT
ACGCCTCAAT CTTGTGGTTT ACCAGCGATT GAAGAATACA AAAATGATTA TCCAGATGAT
TACGATAAGT CTCATGAAAA TGAGATGACA GCAAAAGAGA TTTTCTTTAA ATACGTGTTC
AATAATAAGC TGCTTTGGTC TATCGCGATT GCAAACGCGT TTGTTTATCT GATTCGCTAC
GGTGTGCTTG ATTGGGCTCC TGTGTATTTA AAAGAAGCGA AAGGTTTCAC CGTTGATAAA
TCATCTTGGG CGTATTTCTT ATATGAGTGG GCTGGTATCC CAGGTACATT GTTATGTGGT
TGGATTTCAG ACAAAGTATT TAAAGGACGT CGTGCACCTG CTGGCATCTT ATTTATGGTG
CTTGTAACTG CTGCGGTATT AGTTTATTGG TTTAATCCTG CGGGAAATCC AACGATTGAT
ATGATTGCAT TAGTGGCTAT TGGGTTCTTA ATTTATGGCC CTGTGATGCT TATTGGCCTT
TATGCACTTG AGCTTGTTCC TAAAAAAGCA GCAGGTACTG CGGCTGGCCT TACTGGGTTG
TTTGGTTATC TTGGTGGTGC CGTTACCGCA AACATTGTAT TAGGTTATAC CGTAGACCAC
TTTGGTTGGG ATGGTGGCTT TATGATTCTG GTTGCTTCTT GTGTGTTGTC TATCATGTGC
TTGTGTTACG CCTTCTTAGG AGAGCGTGCA CATCATAAAG CGAAAGACAA AGAGCAAGCG
ACGATATCGT AA
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| Protein sequence | MRITFERNVL FDCSSFMLFT IANIITELTM FGIFKPQAHI ARLASNQIDG TYTRLRWQLF
LSIFVGYAGY YLVRKNFSLA MPYLIDQGFS RGDLGVALAA VSIAYGLSKF LMGSVSDRSN
PRYFLSAGLL MSAAVMFCFG FMPWATNSIT AMFILLFLNG WFQGMGWPAC GRTMVHWWSR
KERGELVSVW NVAHNVGGGL IGPLFLLGLW AFNDDWRSAF YVPAIFATLV AVFIWATLRD
TPQSCGLPAI EEYKNDYPDD YDKSHENEMT AKEIFFKYVF NNKLLWSIAI ANAFVYLIRY
GVLDWAPVYL KEAKGFTVDK SSWAYFLYEW AGIPGTLLCG WISDKVFKGR RAPAGILFMV
LVTAAVLVYW FNPAGNPTID MIALVAIGFL IYGPVMLIGL YALELVPKKA AGTAAGLTGL
FGYLGGAVTA NIVLGYTVDH FGWDGGFMIL VASCVLSIMC LCYAFLGERA HHKAKDKEQA
TIS
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