Gene VSAL_I1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1701 
Symbol 
ID6988680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1799568 
End bp1800635 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content37% 
IMG OID643380023 
Productouter membrane protein, OmpA family 
Protein accessionYP_002263123 
Protein GI209695194 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.908317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATATC TTCATCTATG GATTACATTC TTATTTATTT CATTCTCTCA ATGTTCTTAT 
GCAACAGCAG AATTGCCTAC ATCAACCCAG TCAAATATCA ATACTGAATT TTCTAATTCT
ACCTTATTGC CCGATAATGG CGATTATTGG TATGTTGGTA CCAAATTAGG TTTAAGTGTA
TACCAATATG GTTGTGAGGA ATGGTCAATT GATTGTGATA GAACAGATTT AGGCGGAGGT
TTCTTTGTTG GCTATCAAAT CAACGAAAGC TGGGGAATTG AGCTAGGTAA GACTTTCTTA
GGGGCTGCTA AAGCAGAGTA TTTTTCAAGA AAAGTAACAG GAGATATGGA GACAATTGAT
CTTTTCGGTA AGTATACCTA CGGTCTGACT GATCGTTTTG GTTTTTTTGG CAAAGCTGGT
CTCGCAAACT GGAACGGGAA AACAAAATCT GATTATGTTG AGACAACTAC GTTTGGGCAT
GATTTATCTG TTGGATTTGG AGCTCAATAT GCCCTAAATA AACGTTGGCT TACTCAGCTT
GAATATCAAT ATATAAACAG CATTGGGGAT GATACTGTCG GTGAATCTGA TTACCACCTT
ATGAGTATAG GTATCATTTA TCGATTTGGT TTTCATGAGC TAAAACAACC TTTCTCATGC
CCGATCCCTA ATGAACGTCA AATTATTACC GCTTATGTAG ATGATGAGCT TTTTGATAGC
AACAGCACAA CCATCACTAA ACCAGAACTA CTTGATCCTT TTATTGCTCG ACTTCACTAT
TACTCTGAGT CAACACTTTC TATTATTGGT CATACTGATG CTATCGGTTC CGAGGCTTAT
AACCAATCAT TATCAGAGAA AAGAGCGGAA TCAGTGGCTA AATATTTCAT AAAATCTGGA
ATATCAAATA ACCGTATATC CACCCAAGGC CGCGGTGAAA AAGACCCCAT TGCTCCCAAT
AATACACAAA ATGGTCGTTA TTTAAATCGC CGAGTTGAAC TACGATCTAA TTCATTTCTT
TATATCCCTA ATAAAAAATT AATTACTCAA CATCAAGAGA ATAACTAA
 
Protein sequence
MSYLHLWITF LFISFSQCSY ATAELPTSTQ SNINTEFSNS TLLPDNGDYW YVGTKLGLSV 
YQYGCEEWSI DCDRTDLGGG FFVGYQINES WGIELGKTFL GAAKAEYFSR KVTGDMETID
LFGKYTYGLT DRFGFFGKAG LANWNGKTKS DYVETTTFGH DLSVGFGAQY ALNKRWLTQL
EYQYINSIGD DTVGESDYHL MSIGIIYRFG FHELKQPFSC PIPNERQIIT AYVDDELFDS
NSTTITKPEL LDPFIARLHY YSESTLSIIG HTDAIGSEAY NQSLSEKRAE SVAKYFIKSG
ISNNRISTQG RGEKDPIAPN NTQNGRYLNR RVELRSNSFL YIPNKKLITQ HQENN