| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1590 |
|---|
| Symbol | qnr |
|---|
| ID | 6987217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 1699484 |
|---|
| End bp | 1700140 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643379922 |
|---|
| Product | quinolone resistance determinant QnrC |
|---|
| Protein accession | YP_002263022 |
|---|
| Protein GI | 209695093 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0160927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAT ATAATGAAAT ATTCGATAAC GTGGATTTTT CGAAACAAGA TTTAAGAGAA
TCCTATTTTG AAGGGTGTAA GTTTTATCGA TGTGATTTCA ATCGAACCAA TCTGAGAGAC
TCCCGATTTG TTGATTGTGT TTTTATCGAA CAGGGGGCAA TTGAAGGTTG TCATTTTGAT
TACAGTGACT TAAGGGACGC ATCATTTAAA CGCTGTCGCT TAACCATGTC TAATTTTAAA
GGCGCAAATT GCTTTGGTGT CGAATTTAGA GAGTGTGATT TAAAAGGAGC TAATTTTGTT
CAAGCCAGTT TTGTTAATCA AATAAGTCAT CAAATGTATT TCTGCTCTGC TTATATTACG
GGGTGTAATT TGTCTTATGC GAATTTTGAA CGCCTATGTA TCGAGAAATG TGACTTGTTT
GAGAACAAAT GGAACGGAGC TAATTTACAA GGGGCATCTT TTAAGGGTTC GGACCTTTCT
CGTGGCGCAT TCTCTGAAGA CTCGTGGGGT CAATTTAGAA TGCAAGATGC AAACTTATGT
CATTGTGAAT TGGATGGTTT AGATCCCCGT AGAATTGATT TAACCGGTGT TAAGATCTGT
GCATGGCAAC AAGAGCAATT ATTAGAGCCA TTAGGATTAG TGGTACTGCC TGACTAA
|
|---|
| Protein sequence | MAKYNEIFDN VDFSKQDLRE SYFEGCKFYR CDFNRTNLRD SRFVDCVFIE QGAIEGCHFD
YSDLRDASFK RCRLTMSNFK GANCFGVEFR ECDLKGANFV QASFVNQISH QMYFCSAYIT
GCNLSYANFE RLCIEKCDLF ENKWNGANLQ GASFKGSDLS RGAFSEDSWG QFRMQDANLC
HCELDGLDPR RIDLTGVKIC AWQQEQLLEP LGLVVLPD
|
|---|
| |