| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1581 |
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| Symbol | potB |
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| ID | 6988994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1691299 |
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| End bp | 1692156 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643379913 |
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| Product | spermidine/putrescine ABC transporter membrane protein |
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| Protein accession | YP_002263013 |
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| Protein GI | 209695084 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0688524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAAGA AGTTTAATCT CCAAAATATC ATCATCACCG TTATTGTAAC GTGGTTACTG
TTGTTCGTGT TCATTCCTAA TGTAATGATC ATAGGCACAA GTTTCCTTAC TCGTGATGAA
GCAAATTTAA TCGAAATGAC GTTTACACTA GATAACTATC TTCGTCTTTT TGATCCTTTG
TACGCAAAAG TACTGTGGCA TTCATTTTAT ATGGCCATTG TTGCAACACT ACTGTGTTTA
GTTGTGGGTT ACCCATTTGC TTACATTGTT GCAAAAATGC CAGAAAAATG GCGCCCATTT
ATGCTGTTTT TAATCATTGT TCCTTTTTGG ACTAACTCAC TGATCCGTAC TTACGGACTT
AAAATTGTGT TAGGAACTCA AGGTATTTTG AATAAAGGGT TACTTGCGAT GGATATCATT
GATAAACCAT TACGCATTAT GTATTCAGAA ACAGCGGTAA TGATAGGTTT AGTCTATATC
CTATTACCAT TTATGATTTT GCCTTTGTAC TCTGCAATTG AAAAGCTAGA TAATACCTAT
TTAGAAGCAG CAAAAGATCT TGGCGCAAAT AAGCTACAAA CACTATTAAA AATAGTTCTG
CCATTAACCA TGCCAGGGAT CATTGGTGGT TGCTTATTAG TTCTACTCCC CGCTCTTGGT
ATGTTCTATA TTTCTGATTT ATTAGGCGGC GCGAAAAACC TATTAATCGG TAATGTTATT
AAAAGCCAAG TATTAAACGC TCGAGATTGG CCATTTGGTG CAGCGACCAG TATTGCCCTC
ACCTTGGCAA TGGCATTAAT GCTGTATGCT TATTATCGAG CTGGCAAGTT ATTAAATAAA
AAGGCGGATC TAGACTGA
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| Protein sequence | MNKKFNLQNI IITVIVTWLL LFVFIPNVMI IGTSFLTRDE ANLIEMTFTL DNYLRLFDPL
YAKVLWHSFY MAIVATLLCL VVGYPFAYIV AKMPEKWRPF MLFLIIVPFW TNSLIRTYGL
KIVLGTQGIL NKGLLAMDII DKPLRIMYSE TAVMIGLVYI LLPFMILPLY SAIEKLDNTY
LEAAKDLGAN KLQTLLKIVL PLTMPGIIGG CLLVLLPALG MFYISDLLGG AKNLLIGNVI
KSQVLNARDW PFGAATSIAL TLAMALMLYA YYRAGKLLNK KADLD
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