| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1572 |
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| Symbol | uspE |
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| ID | 6988551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1683229 |
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| End bp | 1684173 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643379904 |
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| Product | universal stress protein UspE |
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| Protein accession | YP_002263004 |
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| Protein GI | 209695075 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.322555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCGCT ATCGTAAAAT ACTCGTTGCA GCGATCATTG ATCAAGAGAA ACAACCCGCT
CTTGAACGCG CATTAGATTT AGCAAATAGA AGTACGAAAT CGACAGATAT TACCCTTTTT
TGTACTATCT ATGATTTCTC TTATGAAATG ACATCCATGC TCTCTCCAGA AGAGCGCACG
GCCATGCGTA ATGGTGTCGT ATCTCAAAAA GTGACGTTTC TTAACTCTCT AGTGTCGTCA
TACACACTCG CAGAGCATAT AACAATAAAA GTAAAAGTCC TTTGGCATAA TCGCCCTTAT
GAAGCCATTA TTAATGAAAT ATTTGACGAC AAATACGATA TATTAATAAA AGCGACCAGA
GAACACGCTA AGTTAGAGAC CGTTTTCTTT ACTCCGACTG ATTGGCATTT ATTGCGAAAA
TCGCCAATTC CAGTTCTACT AGTTAAAGAG CGTTCATGGC CTGAAAATGG CAATATTCTA
GCGTCAGTGC ATGTCGGTTC TGAAAATCCG ACACACATAA AACTTAACGA TAAAATGGTT
GAAGAAGCAC AATATTTCGC TGAAGTATTA AACGCTACGC CTCATTTAGT TAACGCCTAT
CCATCAACAC CACCATCAAT TCATGTTGAA TTACCTGAAT TTGATAGTGT TCATTACAAA
GATGCGATAC GTGGTTATCA CCTAACTGAA ATGAAAGCAC TAAGACAAAA ATACGCTATT
CCAGAAGAGC AAACCCATGT TTATGAAGGG CCAACTGAAG ATGTCATATC CGAAGTCGAA
GATGAGCTGC ATGCTGAACT TGTTATTTTA GGAACCACAG GGCGAACAGG TTTGTCCGCT
ATTTTTATTG GTAACACCGC AGAGAACACA CTTGCGTTAC TAAATAGTGA TATTTTGGCA
CTGAAACCAG AAGGTTATAT TAGCCCTCTT GACCCAAATA ACTAA
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| Protein sequence | MNRYRKILVA AIIDQEKQPA LERALDLANR STKSTDITLF CTIYDFSYEM TSMLSPEERT
AMRNGVVSQK VTFLNSLVSS YTLAEHITIK VKVLWHNRPY EAIINEIFDD KYDILIKATR
EHAKLETVFF TPTDWHLLRK SPIPVLLVKE RSWPENGNIL ASVHVGSENP THIKLNDKMV
EEAQYFAEVL NATPHLVNAY PSTPPSIHVE LPEFDSVHYK DAIRGYHLTE MKALRQKYAI
PEEQTHVYEG PTEDVISEVE DELHAELVIL GTTGRTGLSA IFIGNTAENT LALLNSDILA
LKPEGYISPL DPNN
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