Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1567 |
Symbol | |
ID | 6987202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1678533 |
End bp | 1679018 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643379899 |
Product | hypothetical protein |
Protein accession | YP_002262999 |
Protein GI | 209695070 |
COG category | [S] Function unknown |
COG ID | [COG3198] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTCAAC CTCAACCTTG GTATAAGCAG TTTTGGCCTT GGTTTCTCAT CATTCTTCCA GGCACCGTTG TCGTTGCTTG TATCACTACT TTCGTCCTTT TTGTTCACAA TGATGTCGAT TTAGTTGCTG AAGATTATTA TAAAAAAGGC AAAGCAATTA ACGTTGATCT TTCTAAGATA AAAGTCGCTC AAAACCTCTC GATTTTCGCT AAAGTACGCG ATCTTGGTGA TACAATTGAA ATTCAATTAG ATAAAGGAAA ATTGGAACAT AACCCTGCTA TTAAAGCTAT TTTTACTCAT AGAACATTAC CAGATCGAGA TTTCTCAAAA ATACTCACAT CTGATGCAAA AAGCATTTAT CGCATTCAAT TAGATGAACC ATTAACGGGT CCCTGGTTTA TTGAACTATT ACCACACGAT AGTTCGTGGA TGATCCAAGG TCGCATCAAT TTCCCTACCG TAGACTTTTT TCCTTTAGGT AAATAA
|
Protein sequence | MTQPQPWYKQ FWPWFLIILP GTVVVACITT FVLFVHNDVD LVAEDYYKKG KAINVDLSKI KVAQNLSIFA KVRDLGDTIE IQLDKGKLEH NPAIKAIFTH RTLPDRDFSK ILTSDAKSIY RIQLDEPLTG PWFIELLPHD SSWMIQGRIN FPTVDFFPLG K
|
| |