Gene VSAL_I1564 details

Gene Information

• Locus tag: VSAL_I1564
• Symbol: fixO
• ID: 6988361
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 1676685
• End bp: 1677296
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 643379896
• Product: cbb3-type cytochrome c oxidase subunit II
• Protein accession: YP_002262996
• Protein GI: 209695067
• COG category: [C] Energy production and conversion
• COG ID: [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit
• TIGRFAM ID: [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.53403
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTCTA ATCGTCATGA AATCATAGAA AAAAATGTTG GCCTTCTAGC CGTTTTGGTT 
GTTGTTGCTA TCAGTTTTGG TGCGTTAGTT GAAATCACCC CACTGATTTT CCAAAAGCAA 
ACCACTGAGC CTGTTGATAA CTTACGTGTA TACACACCAC TAGAAATGGA AGGTCGTGAT 
ATTTACATTC GTGAAGGTTG TAACGTATGT CACAGCCAGA TGATCCGACC ATTCCGTGCA 
GAAACGGAAC GTTACGGTCA TTATTCTGTT GCGGGTGAAA GCGTTTGGGA GCATCCATTC 
TTATGGGGCT CAAAACGTAC AGGACCCGAT CTAGCTCGTG TCGGTGAGCG TTATTCTGAT 
GAATGGCATC GAGTTCATTT AATGAACCCT CGTGATGTAG TTCCAGAATC AAACATGCCG 
GGTTTCCCTT GGTTAGCAGA AAACGTGCTT GATGGTGAAT TAACATCGAA GAAAATTGCT 
ATTTTCCGTA ATGATTTTGG TGTGCCATAC ACTGAAGAAG ATGTAAAAAA TGCATCTGAC 
GCAGTCAAAG GCAAGACAGA GATGGATGCG CTTATTGCTT ATCTTCAATC TCTTGGTCAC 
GCAATGAAGT AA 

 

Protein sequence

MSSNRHEIIE KNVGLLAVLV VVAISFGALV EITPLIFQKQ TTEPVDNLRV YTPLEMEGRD 
IYIREGCNVC HSQMIRPFRA ETERYGHYSV AGESVWEHPF LWGSKRTGPD LARVGERYSD 
EWHRVHLMNP RDVVPESNMP GFPWLAENVL DGELTSKKIA IFRNDFGVPY TEEDVKNASD 
AVKGKTEMDA LIAYLQSLGH AMK