| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1557 |
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| Symbol | |
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| ID | 6988463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1667882 |
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| End bp | 1669549 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643379889 |
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| Product | putative protease La homolog |
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| Protein accession | YP_002262989 |
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| Protein GI | 209695060 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00224903 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTAG ACACGCCATT TTTACTCGAG CCTCAGTACG ATAATATTCT TGATATATTG
AATTTATCCC ATGTCAGTGA CGCACAATCA CCCTATTCTC TTCAGCCTAG GTTAACCCAA
GCTTTAGCGG ATTTTTCTCG TATAAATGGT GTTAACATTT TGCAAATCAA TGCGTTAGAT
AATCACGTTT ATCGTGAATA TGTAGCGAAT TGGCTAATAC TGAATGCTGA AAATCGCGTA
TTAAATTCAG AAGCACCTCC TGTCATTATA GTTGAAAGCG CTTCTGACTC AGAGCTCTTT
GGTGTTTACC ATAATAAAAG TGATGTGTTA GAAACTGGGT TATTACAAAA AGCCGATGGC
GGTTTTTTGG TAATGTCCCC AAGTGTTTTA CTTGCAAATC CTCATTTATG GCCACGCCTA
AAAAGTTTGC TGCAAGGCCA TTCAGTTACT ATCCCCGCGA GTGATTCAAA ATCACCGATG
ACTAACATCC ATTATTTAAC AGCGAATGTT AAATTAATTA TTGTTAGTGA CCGTGCACTT
TTAGGGGAAA TAGAGCTATT AGAACCCGAT CTACTTACTG GTATGTCGAT GTTTTCTGAA
TATGAGTTGG ATACACCGTT ATCTAGTAAC ACTGTCACTG GTTATGTGCA GCTAATTCAA
TCACTTTCAA ATAAGCATAA TCATTTACCA CTAGCAAACG GCTCTTCGTT GCTTCCCCTA
CTCAAACTAG GTGCTCGTGA ATGTGAAGAT CAGACTCGAC TTAATTTGTG TTTATTATGG
TTAAATTCTA TTTTAGCGCA TGCTTCTTTA GCTTCTGAAT CAAAAACACA TATTAGCGCT
GATGATTTTA CACAATCATT TGAAGCAAAA TATTACGTAG AATCTTATTT ACCATCCCGA
GCTTTAGACG ATATTTTAGA ACAAAATATT CATATTGAAA CTCAAGGTCA AAAAATTGGG
CAGATTAACG GCTTGACTGT CGTATCAGTA CCTGGTCATC CAATTTCTTA TGGTGAGCCA
TCGCGAATAT CTTGTGTTGT TCACCCTGGA GATGGCGAAT TATCGGATGT TGAACGAAAG
GTAGAGTTAG GTGGTGATTT ACATGCGAAA GGCATGTTAA TTATGCAAGC TTATATACTA
AGCCAATTAG ATACACATGA ACCACTGCCT TTTACTGCTT CAATGGTTTT CGAACAATCT
TATTGTGAAG TCGATGGGGA TAGCGCAAGT CTTGCTGAAT TATGTGCATT ACTTAGTGCC
CTCGCTATTA CGCCGATTAA TCAAAGTTTA GCGATAACAG GATCTGTTGA TCAGTTCGGT
ATGGTGCAAC CCATTGGCGG TGTAAATGAA AAAATTGAAG CCTTCTTTCA GCTGTGTGAT
AAACGCGGGT TAACTGGAGA GCAAGGTGTT ATTATCCCAC AAACAAATGG AATTAATCTT
GTACTTTCAG ATGATGTGAT TCGAGCTGTT GAGCAAAAAC AGTTTACAAT TCATCCTATT
AGTCATGTTG AGCAAGCTGT TGAATTATTA ACGGGCTTAC CATTACAATC TGAAGAACAT
GAATCGATGT TCTCTTTAAT TGCCCAACAC ATTGACAAAA TAGAGCATAA TCCGAGTCAA
TGTTCTGCTC TATTTTGTCG TATTAAGAAC TGGTTTAACC AGAGCTGA
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| Protein sequence | MQLDTPFLLE PQYDNILDIL NLSHVSDAQS PYSLQPRLTQ ALADFSRING VNILQINALD
NHVYREYVAN WLILNAENRV LNSEAPPVII VESASDSELF GVYHNKSDVL ETGLLQKADG
GFLVMSPSVL LANPHLWPRL KSLLQGHSVT IPASDSKSPM TNIHYLTANV KLIIVSDRAL
LGEIELLEPD LLTGMSMFSE YELDTPLSSN TVTGYVQLIQ SLSNKHNHLP LANGSSLLPL
LKLGARECED QTRLNLCLLW LNSILAHASL ASESKTHISA DDFTQSFEAK YYVESYLPSR
ALDDILEQNI HIETQGQKIG QINGLTVVSV PGHPISYGEP SRISCVVHPG DGELSDVERK
VELGGDLHAK GMLIMQAYIL SQLDTHEPLP FTASMVFEQS YCEVDGDSAS LAELCALLSA
LAITPINQSL AITGSVDQFG MVQPIGGVNE KIEAFFQLCD KRGLTGEQGV IIPQTNGINL
VLSDDVIRAV EQKQFTIHPI SHVEQAVELL TGLPLQSEEH ESMFSLIAQH IDKIEHNPSQ
CSALFCRIKN WFNQS
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