| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1471 |
|---|
| Symbol | |
|---|
| ID | 6987120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 1586716 |
|---|
| End bp | 1587504 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643379813 |
|---|
| Product | putative antibiotic resistance protein |
|---|
| Protein accession | YP_002262913 |
|---|
| Protein GI | 209694984 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.292447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAC TTCAAGGTGG GCGTGAAGGG CGGGTTTTCC GCTCTGAGAA TAAGGTTTAT
CGACCACGTG GTAAGTGGTC TGAAACCATA CATAGTTTGT TGTCACATAT TGCCGAAAAT
GGTTTTAATG CAGCTCCTAA GCCTTACGGT TTTGATGGCA AAGATAATGA AGTTTTATCT
TATGTCGAAG GAGAGGTTTT CAATTATCCG CTAAAAGGCA ATATTGCCAC GATTGAAGCA
CTGACTTCTG CAGCTAAACT TCTTCGTTTA TACCACGATG CATCTAGTCC GTTTCTATCA
AATCATTCAG TTGAATCATT AGAGTGGATG CTTCCCAGTA GAGAACCTAT GGAAGTTATC
TGTCACGGAG ACTACGCGCC ATACAATGTT GCATTGGTTG GATCAGAAAC CGTGGGTATT
ATCGATTTTG ATACTGCGCA TCCCGCGCCG CGAGTTTGGG ATATCGCTTA TGCCGTGTAT
TGTTGGGCTC CATTTAAAAC CCATGAGTAT GATGCAATGG GGGATTTAGG ATCTCAGTCT
ATACGAGCCA AGCAGTTTTG TGATGTTTAT GGTTTGCTTG AAGCTGATCG TTTGGTTTTA
GTTAAAGCAA TGACAGAGAG AGTTCAAGCG TTGGTTGACC ATATGCACAA TGAAGCAAGT
AATGGTAATC AAGCTTTTAT CGAAAATATC AAAGACGGTC ACCATTTAGC GTATCTAGCA
GATATCCAAT ATTTGAATGA CAATGAGCAG TATATTACCG ATGTAGTGGT TGGTAAAAAG
TGCTTATAA
|
|---|
| Protein sequence | MEELQGGREG RVFRSENKVY RPRGKWSETI HSLLSHIAEN GFNAAPKPYG FDGKDNEVLS
YVEGEVFNYP LKGNIATIEA LTSAAKLLRL YHDASSPFLS NHSVESLEWM LPSREPMEVI
CHGDYAPYNV ALVGSETVGI IDFDTAHPAP RVWDIAYAVY CWAPFKTHEY DAMGDLGSQS
IRAKQFCDVY GLLEADRLVL VKAMTERVQA LVDHMHNEAS NGNQAFIENI KDGHHLAYLA
DIQYLNDNEQ YITDVVVGKK CL
|
|---|
| |