Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1435 |
Symbol | |
ID | 6987090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1550006 |
End bp | 1550791 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643379783 |
Product | hypothetical protein |
Protein accession | YP_002262883 |
Protein GI | 209694954 |
COG category | [S] Function unknown |
COG ID | [COG4336] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAGG ATTTATCACT CGATAATTTA CGTAAAAAAA TCAGAAGTAA TGAGTTCACA AAAGCGACTT CAGGCTATGC TCCGGGTTAT TTACAAGCCA ATCTCGTTAT TTTACCGGCT CTTTGGGCGA CTGATTTCTT ACTTTTTTGT CAGAAAAATC CTGTGGCATG CCCATTGATC GACGTCACTC AACCAGGAGA GAGATACCTT CCTTCCATTG GTGCTGATAT TGATTTGTCG AGGGACGTTC CCGAATATCA TGTGTTCTAT GAGGGTAATT TTGAAGCCTC AGTGCCCGAT CTTACCGAAC TGTGGCAAGA CGATTTAGTG ACGTTTGTTC TTGGTTGTTC TTTCTCGTTT GAAGAAGCCC TAATCCAATC AGGTTTGTCT ATTCGAAATA TTGATGATGG AAAAAATGTC TCCATGTATG ACACAAACAT AGCTTGCCAA CCCGCAGGGA AGTTTGACGG AAACTTTGTG GTTTCTATGC GCCCATTTAC ACCAAAGGAT GCAATTCGTG CGATTCAAAT AACGACTCGA TTCCCTAAAT CCCATGGCGC ACCAGTGCAT TTTGGTGATC CTAGCGTGAT TGGCATTTCA GACATCGCTA AACCAAATTA TGGAGAGGCG GTTCATATCA ATTCAGATGA AATTCCTGTG TTTTGGGCAT GTGGTGTCAC ACCGCAAAAT GTGATCCGCC AAAGTCGTCC TCCTTTCTGT ATTACCCATG CTCCAGGAAA AATGTTGATC ACCGACCGCT TAAGTTCTGA GTTTGCCGTG CTCTAG
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Protein sequence | MDKDLSLDNL RKKIRSNEFT KATSGYAPGY LQANLVILPA LWATDFLLFC QKNPVACPLI DVTQPGERYL PSIGADIDLS RDVPEYHVFY EGNFEASVPD LTELWQDDLV TFVLGCSFSF EEALIQSGLS IRNIDDGKNV SMYDTNIACQ PAGKFDGNFV VSMRPFTPKD AIRAIQITTR FPKSHGAPVH FGDPSVIGIS DIAKPNYGEA VHINSDEIPV FWACGVTPQN VIRQSRPPFC ITHAPGKMLI TDRLSSEFAV L
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