Gene VSAL_I1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1387 
Symbol 
ID6987048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1503335 
End bp1503823 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content38% 
IMG OID643379742 
Productputative lipoprotein 
Protein accessionYP_002262841 
Protein GI209694913 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0376898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGCA ATATCTCTTT AATCTTTGGC TTTATCCTAT TAAGTAGCAT CGCAGGCTGT 
AGCTCTACGC CACCCTCCCA ACAATTATCG AAACAAGATA TTGAAGTTAA ATACCCACAG
TTGAAGCAAT CCGATGGCTA TCAAGATTAT TTTCGAGAAT GGCAAGGCGT CCCTTATAAA
TACGGTGGAA TAAGTAAAGA TGGTGTGGAT TGCTCAGCTT TTACTCAAGA CGCACTTCAA
ACATTACATC AATTATCTTT ACCTAGAACG ACTGAGTATC AAATATCAAC GGGGCAGAAA
ATTGCGCTCG TAAATGCAAA GAAAGGCGAT CTTATTTTCT TTAAAACAGG AATAAAAGTA
AGACATGTAG GTGTGTATAT TGGAAACCGT GAATTCATGC ATGCTTCAAC ATCAAAAGGC
GTCATTATCT CAAGTCTTGA TAATCCATAT TGGAAAAAAG CGTATTGGCA AGCAAGGCGA
GTGTTGTAA
 
Protein sequence
MTRNISLIFG FILLSSIAGC SSTPPSQQLS KQDIEVKYPQ LKQSDGYQDY FREWQGVPYK 
YGGISKDGVD CSAFTQDALQ TLHQLSLPRT TEYQISTGQK IALVNAKKGD LIFFKTGIKV
RHVGVYIGNR EFMHASTSKG VIISSLDNPY WKKAYWQARR VL