Gene VSAL_I1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1364 
Symbol 
ID6987033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1482981 
End bp1485653 
Gene Length2673 bp 
Protein Length890 aa 
Translation table11 
GC content41% 
IMG OID643379720 
Productputative exported nuclease 
Protein accessionYP_002262819 
Protein GI209694891 
COG category[R] General function prediction only 
COG ID[COG2374] Predicted extracellular nuclease 
TIGRFAM ID[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.587865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGCA GTGAAATGAA AACAACCCAA TTAAAAACAA CACTTGCAGC AGCTGTTGGC 
TTAGCACTCT CAGGCAGCGC TTACGCGGAT GTGATTATAT CTCAATACGT AGAAGGTGGA
AGTTACAATA AATCGTTAGA AATCAGTAAT ACAGGAGACA GTTCAGTTTC TCTCGCGGGG
TATGTTCTTA AATCAAAATA CAATGGTTTA AACGAATGGC AAAAGGATCT TGATCTTTCT
GCCATTACGC TTGATGCAAA GAGCGTTTAT GTCATCTCAA ACAGTCGAGC CTCTGATGCG
ATCAAAGCCG TAACCAATAA TATTGAAAGC ATCGTAAATC ATAACGGCGA TGACACTTAC
ATGCTGTTTA AAGATGGGAT AGAACACGAC CGTATTGGGG TCGATGGCGA CGTAGATTGG
GGCAAAGATA AGAGCTTTGT CCGCTCAACA TTAAGTCCAA GTACAACATT TGATCCAACG
ATGTGGCTTG AGTTACCAAA AGACAATATT GATGGCCTTG GTACTTACCA AGAAGGCATT
ACTCCTCCTC TCCCTTTTGC TTGTGAAACC GATTCAGGCA CGACCCCTAC TTTTACAGAG
ATTAATGAGA TTCAAGGTAC GGGAAATAAA TCGCCGTTAA TCACGAGTGG CTTTATTTCA
GACGACGAGT ATTTTGTTCA AGGCATTGTG ACTGCTCGGG GCGACAGCTT GTTAAAAGGC
TTTTACCTGC AAGGCCTAAA TAATGACAAT GATCCAAACA GCTCTGAAGG TATTTTCGTC
AGTACTGGCA GCGCCCCTTC CCAAGAGATC CAACCAGGGG CATTAGTCTG TGTTAAAGCA
AAAGTTCAAG AATATTATAG CCAAACACAA TTAAAACCAG ACACCAATAA CGTCGTTGTT
CAAGGTTCAC AATCTCCTGT TGATGTCACT GAACTGGTCA TCAATGAGAA TGAAACATTA
GCAGATGCAT TAGAGCGTCA CGAAGGCATG CACGTTAAAT TAACCTCTCA TTCCGATTTA
CGAATTACGC GTAATTTCAG TTTTGATTAC GACAGTAAAC GCAACAATAT GGTGTTGTCT
CATGGTGCAC CACTGTATAA ACCAACTCAG TTATTTGCAG CAGAAAGTAC AGAGGCCATT
CAGCTAGCAA AAGAGAATGC TAAGCGTCAA ATCACCATAG AATCAGACAA CAAAGCCGCA
AACGGAAAAG TGCCTTACTT CCCAGAGTTT GCCTCTGATA TCGACCAAGA TGGCAGTGCC
GATTCTTACC TTCGTCTTGG TGCTAGAATT GAAGGACTAG AAGGAGTGGT TGCTTATTCT
TACGGTCAAT ATCGCTTGGT TGCAAGTAAT ACCATCACAC AAGAAAACAT CATTACTAAA
GCCTTAAATA CCGATGGTTC TACGCTCTTC AATGTAGAAC GTACTGACAA ACCAAGTATT
GATGATGAAG ATTTAACTAT TACCAGTTTT AACGTTTTAA ACTACTTCAC CTCTGTTTCT
ATAAACGGTG ATGCAAACCC AACAGGTCAA AACCGTGGCG CAACAACAGC TGATGAGTTT
GCAATTCAAC AAGCAAAAAT TCTATCGGCC TTAACCGCCA TTGATGCTGA CATTATTGGT
TTGATGGAAA TTGAAAATAA TGGCTTTGGT GAAAACAGTG CCATTCATGA TCTCACTGCC
GTGTTAAATG CACAATTTGA AGACAAAGAA GATCACTATA AATACGTTGA GATAGACGCT
GCGGATAAAT ACCAAGGTGA GTATTTAGGC TCTGACGCCA TTATGGTCGC CCTGTTGTAT
CGTCCTGACA AAGTAAGATT AGAAGGTGAT GCACGCGTAA TAAAAACACC GGAGCAACAC
GTCACGGCAA ACACCGTCAC TCGAGATAAC AACGGCACTA TTGAATCAAA CCCTGCGTAT
GATAAATATC AACGCCACAG CTTGGTTCAA GAGTTTATTG TAAAAGAAGC CAAAGAGCCG
CTAACCGTTG TCGTTAATCA CTTAAAATCA AAAGGATCAG AGTGTATTGA ACAATGGCAG
AACTTCAATG AAGACTCAGA AGCGCCTGAC TTACAAGGCA ATTGTAATCG CTTTAGAGTC
TCAGCAGTAA AAGCCATTGG TGATGAATTA AGTACAGTTG AAGGCGATAT TCTGATCTTA
GGTGACATGA ATGCGTATGG TATGGAAGAC CCATTACTTA CGCTGACAGA TTACAGCCCT
GATAAATACG ATCGCGACAT CTTTACGGCG TCTTATACCA CTCTTGGAAA CGATACCGCC
GGTAACCCTA TCCCTTATGA AGAAACAGGC AGCCAAATCA AAAAAGGGTA CGGATACCTT
AATCTAAATA CCTTGTTGCA CAGCACAGAA ACCTTCTCTT ATACCTACTC AGGGGAATTA
GGTAATCTTG ATCACGCACT CGCTAATGAA TCTCTTGCAA AACGAGTCAC TCAAATTGAA
GATTGGCACA TTAATGCCAC AGAAAGTAAC TTGTTTGAAT ACAGCTCAAA GTACACTGGC
GACATGGCAA AATACAACGA TATGTATTCG GCTTCTGACC ACGATCCTGT TGTTATTTCT
CTTGAATATG CAGGCTCACT CAACCTACTT GCTTTATCTT CACTCTTTGG TTTTGGCTAT
CTGCGTCGAA AACTAAACAA AGACAATAAA TAA
 
Protein sequence
MESSEMKTTQ LKTTLAAAVG LALSGSAYAD VIISQYVEGG SYNKSLEISN TGDSSVSLAG 
YVLKSKYNGL NEWQKDLDLS AITLDAKSVY VISNSRASDA IKAVTNNIES IVNHNGDDTY
MLFKDGIEHD RIGVDGDVDW GKDKSFVRST LSPSTTFDPT MWLELPKDNI DGLGTYQEGI
TPPLPFACET DSGTTPTFTE INEIQGTGNK SPLITSGFIS DDEYFVQGIV TARGDSLLKG
FYLQGLNNDN DPNSSEGIFV STGSAPSQEI QPGALVCVKA KVQEYYSQTQ LKPDTNNVVV
QGSQSPVDVT ELVINENETL ADALERHEGM HVKLTSHSDL RITRNFSFDY DSKRNNMVLS
HGAPLYKPTQ LFAAESTEAI QLAKENAKRQ ITIESDNKAA NGKVPYFPEF ASDIDQDGSA
DSYLRLGARI EGLEGVVAYS YGQYRLVASN TITQENIITK ALNTDGSTLF NVERTDKPSI
DDEDLTITSF NVLNYFTSVS INGDANPTGQ NRGATTADEF AIQQAKILSA LTAIDADIIG
LMEIENNGFG ENSAIHDLTA VLNAQFEDKE DHYKYVEIDA ADKYQGEYLG SDAIMVALLY
RPDKVRLEGD ARVIKTPEQH VTANTVTRDN NGTIESNPAY DKYQRHSLVQ EFIVKEAKEP
LTVVVNHLKS KGSECIEQWQ NFNEDSEAPD LQGNCNRFRV SAVKAIGDEL STVEGDILIL
GDMNAYGMED PLLTLTDYSP DKYDRDIFTA SYTTLGNDTA GNPIPYEETG SQIKKGYGYL
NLNTLLHSTE TFSYTYSGEL GNLDHALANE SLAKRVTQIE DWHINATESN LFEYSSKYTG
DMAKYNDMYS ASDHDPVVIS LEYAGSLNLL ALSSLFGFGY LRRKLNKDNK