| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1347 |
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| Symbol | |
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| ID | 6988941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1462671 |
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| End bp | 1464215 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643379705 |
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| Product | fumarate hydratase class I |
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| Protein accession | YP_002262804 |
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| Protein GI | 209694876 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACG TTAATAAAGA AATGGTTGCT CAAACGAGAA CAACTATTCG TAATGAAGAT
GTGATCAGCT CTGTTGCTGA TGCACTGCAG TATATTTCTT ACTACCACCC ACTTGATTTC
GTTCAAGCGC TTGAAAAAGC CTACCATAGA GAACAGAGTC AAGCGGCTAA AGACGCAATT
GCTCAAATAT TAATTAATTC ACGTATGTCA GCAGAAGGGC GTCGTCCTAT TTGTCAGGAT
ACGGGGATTG TGACTTGTTT CGTTAATATT GGTATGAACG TACAGTGGGA AGGGGATTTA
ACCGTTCAAC AAATGATCGA TGAAGGTACT CGTCAAGCGT ACCTTAACCC AGATAATCCA
CTACGTGCAT CAATACTGTC TGATCCTGCT GGTAAACGTA TTAATACGAA AGACAATACG
CCATCGGTCG TGCACATCAA TATGGTTCCG GGTAATACCG TTGAGATTCA AATCGCAGCA
AAAGGCGGCG GTTCTGAAAA TAAAACCAAA ATGGTGATGC TAAACCCATC AGATGATATT
GCGGAATGGG TAGAAAAAAC CTTGCCATTA ATGGGCGCGG GTTGGTGTCC ACCAGGTATG
CTAGGTATCG GTATTGGTGG TACAGCAGAA AAAGCCGCCG TGTTAGCGAA AGAATCGTTA
ATGGGTCACA TTGATATTCA AGAATTGATT GACCGTGGTC CAGAGAATGC AGAAGAAGAA
CTGCGTCTTG ATATCTTTAA TCGTGTGAAT AAGCTAGGCA TTGGTGCACA AGGTCTTGGC
GGATTAACCA CGGTTGTTGA TGTGAAAATA AAATCTGCAC CGACACATGC CGCTTCTAAG
CCTGTGTGCA TGATCCCTAA CTGTGCAGCA ACACGTCACG TACATTTTAC CCTTGATGGT
TCGGGCCCTG CTGATCTTCA GCCGCCAAAA CTGGAAGAGT GGCCAGACAT CACATGGGAA
GCGGGCGCGA ATACACGTCG TGTGAATCTT GATGGACTGA CCAAAGCTGA CGTACAAGAA
TGGCGCACAG GTGAAACGGT TCTACTAACT GGCAAGATTT TAACCGGTCG TGACGCGGCT
CATAAACGTC TGCAAAGCAT GATTGAAAGC GGCGAAGGTT TACCAGAAGG TGTCGATTTT
AATGGTAAGT TCATTTATTA CGTTGGCCCT GTTGACGCAG TGCGTGACGA AGCCGTTGGT
CCTGCGGGTC CAACGACATC AACACGTATG GATAAGTTTA CTGACATGAT GCTAGAAACG
GGTCTAATGG GAATGATCGG TAAAGCAGAG CGTGGCCCTG CAACCGTAGC GTCTATTAAA
GCCAAAAAAG CGGTTTATTT AATGGCCGTC GGTGGTGCCG CATATCTCGT ATCTAAAGCG
ATTAAAAAAG CAAGAGTGGT TGCTTTTGAA GAGCTAGGAA TGGAAGCGAT TTATGAATTT
GATGTGGAAG ACATGCCAGT GACTGTTGCG GTTGATTCAA CGGGCGCAAA TGCACACCAA
ATTGGTCCCG ATACGTGGAA AGTAAAAATC GCAGAAATGG AATAA
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| Protein sequence | MTNVNKEMVA QTRTTIRNED VISSVADALQ YISYYHPLDF VQALEKAYHR EQSQAAKDAI
AQILINSRMS AEGRRPICQD TGIVTCFVNI GMNVQWEGDL TVQQMIDEGT RQAYLNPDNP
LRASILSDPA GKRINTKDNT PSVVHINMVP GNTVEIQIAA KGGGSENKTK MVMLNPSDDI
AEWVEKTLPL MGAGWCPPGM LGIGIGGTAE KAAVLAKESL MGHIDIQELI DRGPENAEEE
LRLDIFNRVN KLGIGAQGLG GLTTVVDVKI KSAPTHAASK PVCMIPNCAA TRHVHFTLDG
SGPADLQPPK LEEWPDITWE AGANTRRVNL DGLTKADVQE WRTGETVLLT GKILTGRDAA
HKRLQSMIES GEGLPEGVDF NGKFIYYVGP VDAVRDEAVG PAGPTTSTRM DKFTDMMLET
GLMGMIGKAE RGPATVASIK AKKAVYLMAV GGAAYLVSKA IKKARVVAFE ELGMEAIYEF
DVEDMPVTVA VDSTGANAHQ IGPDTWKVKI AEME
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