Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1345 |
Symbol | |
ID | 6989225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1460522 |
End bp | 1461130 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643379703 |
Product | NUDIX hydrolase |
Protein accession | YP_002262802 |
Protein GI | 209694874 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACTTA AACTAAGGAT CCGGCTTATG GATACACATT TATTGTCTCA TTTATTACTC AATAAGCCGA ATTCATACAG TGAAGATTTA TTGCTGCACC CTCGCTTTAA AAACACAAAT TTTAAGCAAG CCGCCGTCCT CGTTCCTCTC GTAAAAAGGC CCTCTGGATT GCACTTAATT TTGACTCAAA GAGCCGCTCA TTTACACCAT CATCCAAGTC AAATTAGCTT CCCTGGAGGC AAGGCCGAAC CGTCTGATTT ATCCTTAATT CATACTGCAA TTCGTGAGAC AAATGAAGAG ATCGGCATTC AACTTGAACA AATACACCCA TTAGTAAAAC TTAACACAAT ACCAACAATA TCCGGTTATA AAGTAACCCC TATCGTTGCA CTTATTGATG AAAATTATAC CACCGCAATC GATTACGGTG AGGTTAGTAG CACATTTGAA GCACCACTCT CCCACCTACT TAACCCAATG AATACGACAA AGCACAAAGT TTTTAACAAA AAACACACGT ATGAGTTAAT TTTTATTCCT TTTAATAAAA AACTCATTTG GGGAATTACC GCAGAAATCA TTCATTCAAT GAATCACATT ACAAATTAG
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Protein sequence | MSLKLRIRLM DTHLLSHLLL NKPNSYSEDL LLHPRFKNTN FKQAAVLVPL VKRPSGLHLI LTQRAAHLHH HPSQISFPGG KAEPSDLSLI HTAIRETNEE IGIQLEQIHP LVKLNTIPTI SGYKVTPIVA LIDENYTTAI DYGEVSSTFE APLSHLLNPM NTTKHKVFNK KHTYELIFIP FNKKLIWGIT AEIIHSMNHI TN
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