Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1334 |
Symbol | |
ID | 6989222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1449467 |
End bp | 1449952 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643379694 |
Product | putative thioesterase |
Protein accession | YP_002262793 |
Protein GI | 209694865 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.806608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAGA ACAAACGCGA AGTAACCTTA CGTTTTCTTG CTGAACCTAG TGATGTGAAT TTTGGCGGTA AAGTTCACGG TGGTGCCGTA ATGAAATGGG TCGATTTAGC GGCCTATGCG TGTTCTGCCG GATGGAGTGG TAAATATTGC ATTACCGCTT ACGCTGGGGG AATTCGATTT GTTCAACCCA TTCATGTGGG TAATCTTGTT GAGGTGACGG GTAAAGTTAT TTATACCGGA AAATCATCAA TGCACATTGC TATTGATGTG CAAGCCAGTG ATCCAAAAGA ATTAGAAAAT AGATTAACGA CTCACTGTAT TGTCATTATG GTTGCCGTTG ATGAACATGG AAAACCAACT GAAGTCACTG AATGGGTACC ACAAACAGAA GAAGACATTA AATTACGTGA ATCTGCAATT ACATTAATGA ATATGAGAAA GCAGATTGGT GAAGAGATGG AAGCACATGT AAAATATTTG AAGTAA
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Protein sequence | MGKNKREVTL RFLAEPSDVN FGGKVHGGAV MKWVDLAAYA CSAGWSGKYC ITAYAGGIRF VQPIHVGNLV EVTGKVIYTG KSSMHIAIDV QASDPKELEN RLTTHCIVIM VAVDEHGKPT EVTEWVPQTE EDIKLRESAI TLMNMRKQIG EEMEAHVKYL K
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