Gene VSAL_I1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1334 
Symbol 
ID6989222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1449467 
End bp1449952 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content40% 
IMG OID643379694 
Productputative thioesterase 
Protein accessionYP_002262793 
Protein GI209694865 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.806608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAGA ACAAACGCGA AGTAACCTTA CGTTTTCTTG CTGAACCTAG TGATGTGAAT 
TTTGGCGGTA AAGTTCACGG TGGTGCCGTA ATGAAATGGG TCGATTTAGC GGCCTATGCG
TGTTCTGCCG GATGGAGTGG TAAATATTGC ATTACCGCTT ACGCTGGGGG AATTCGATTT
GTTCAACCCA TTCATGTGGG TAATCTTGTT GAGGTGACGG GTAAAGTTAT TTATACCGGA
AAATCATCAA TGCACATTGC TATTGATGTG CAAGCCAGTG ATCCAAAAGA ATTAGAAAAT
AGATTAACGA CTCACTGTAT TGTCATTATG GTTGCCGTTG ATGAACATGG AAAACCAACT
GAAGTCACTG AATGGGTACC ACAAACAGAA GAAGACATTA AATTACGTGA ATCTGCAATT
ACATTAATGA ATATGAGAAA GCAGATTGGT GAAGAGATGG AAGCACATGT AAAATATTTG
AAGTAA
 
Protein sequence
MGKNKREVTL RFLAEPSDVN FGGKVHGGAV MKWVDLAAYA CSAGWSGKYC ITAYAGGIRF 
VQPIHVGNLV EVTGKVIYTG KSSMHIAIDV QASDPKELEN RLTTHCIVIM VAVDEHGKPT
EVTEWVPQTE EDIKLRESAI TLMNMRKQIG EEMEAHVKYL K