| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1329 |
|---|
| Symbol | asnC |
|---|
| ID | 6987007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 1441205 |
|---|
| End bp | 1442605 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643379689 |
|---|
| Product | asparaginyl-tRNA synthetase |
|---|
| Protein accession | YP_002262788 |
|---|
| Protein GI | 209694860 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.155232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTACG CGCCTGTAAC AGACGTATTA AGCGGCAAAC TAGCGGTTGA CAGTGAAGTA
ACTGTTCGCG GTTGGATCCG TTCGCGTCGC GATTCTAAAG CGGGAATTTC ATTCCTAGCT
ATTTATGACG GTTCTTGTTT CGATCCGATT CAGGCCGTGG TTCCTAATGA CTTAAATAAT
TACAATGAAG AAGTCCTAAA ACTAACAACA GGTTGTTCTG TTGAAGTTAC GGGGACTATC
GTTGCATCTC CTGCTAAAGG TCAAGATTTC GAACTTGCTG CAACCGCAGT AAAAGTCGTT
GGTTTAGTTG AAGACCCAGA TACCTACCCA ATGGCGAAAA CTCGTCACTC AATTGAGTAT
TTACGAGAAG TTGCTCACCT TCGCCCACGT ACTAACGTGA TTGGCGCGGT TGCACGTGTT
CGTAACTGTT TGTCTCAAGC GATTCACCGT TTTTACCACG AGCAAGGTTA CTTATGGATG
TCTGCACCAC TAATCACATC ATCTGATGCT GAAGGTGCTG GTGAGATGTT CCGCGTTTCG
ACATTAGATC ACGCGAACGT GCCTCTTGAT GACAAAGGCA ATGTTGATTA CGACAAAGAC
TTCTTTGGTA AAGAGACATT CCTTACGGTA TCTGGTCAAT TAAATGCTGA AACTTACGCT
TGTGCATTAA GCAAAGTGTA CACATTTGGC CCGACTTTCC GTGCTGAAAA CTCACACACA
AGTCGCCACC TAGCTGAATT CTGGATGGTT GAACCTGAGG TTGCTTTTGC TGACCTAGAT
GACGTTGCAA AACTGGCTGA AGACATGCTT AAGTATGTAT TCGAAGCGGT TCTTGCTGAG
CGTCGTGATG ATCTTGAATT CTTTGCTTCT CGCATTGATA AAGAAGCAAT CACTCGTCTA
GAGCAATTTG TAAGTTCTGA TTTTGCACAA GTAGATTACA CTGACGCAAT CCAAATCCTT
ATCGACTCTG GTAAGAAATT TGAATTTGAC GTTGAGTGGG GCATCGATAT GTCTTCTGAG
CATGAGCGTT TCCTTGCTGA AGAACATTTC AAAGCACCGG TTATCGTTAA AAACTACCCT
AAAGACATTA AAGCATTCTA CATGCGTCAA AATGACGATG GTAAGACAGT TGCTGCGATG
GATGTTCTTG CACCAGGCAT TGGTGAGATC ATCGGTGGTT CTCAACGTGA AGAGCGTTTA
GACGTTCTTG ATGCACGTAT GATTGAAATG GGTATCGACC CTGAACACAT GACTTGGTAC
CGCGATTTAC GTCGTTACGG TACTGTACCT CACGCTGGCT TCGGTCTTGG TTTTGAGCGT
CTAGTGTCTT ACGTAACTGG TATGGGCAAC GTTCGTGACG TTATCCCGTT CCCACGTACT
CCGCGTTCAG CTAACTTCTA A
|
|---|
| Protein sequence | MTYAPVTDVL SGKLAVDSEV TVRGWIRSRR DSKAGISFLA IYDGSCFDPI QAVVPNDLNN
YNEEVLKLTT GCSVEVTGTI VASPAKGQDF ELAATAVKVV GLVEDPDTYP MAKTRHSIEY
LREVAHLRPR TNVIGAVARV RNCLSQAIHR FYHEQGYLWM SAPLITSSDA EGAGEMFRVS
TLDHANVPLD DKGNVDYDKD FFGKETFLTV SGQLNAETYA CALSKVYTFG PTFRAENSHT
SRHLAEFWMV EPEVAFADLD DVAKLAEDML KYVFEAVLAE RRDDLEFFAS RIDKEAITRL
EQFVSSDFAQ VDYTDAIQIL IDSGKKFEFD VEWGIDMSSE HERFLAEEHF KAPVIVKNYP
KDIKAFYMRQ NDDGKTVAAM DVLAPGIGEI IGGSQREERL DVLDARMIEM GIDPEHMTWY
RDLRRYGTVP HAGFGLGFER LVSYVTGMGN VRDVIPFPRT PRSANF
|
|---|
| |