Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1327 |
Symbol | |
ID | 6987005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1438827 |
End bp | 1440365 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643379687 |
Product | hypothetical protein |
Protein accession | YP_002262786 |
Protein GI | 209694858 |
COG category | [S] Function unknown |
COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.592833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGAT ATATTGTTTT TTTTACACTT CTTTTTTGTT ATTTTCCCCT ATCTGCTCAA ACGGAAGACG CTGATACTTA CATAAGAAAG CATCAAGGTT CGCTGTATTA TGCTTCAGAT GTGTCTCGTT TATATCCAAA CTCTCAACGT AAATGGAATC GTGCCGAGGA TAGAAAAGAA ATAGAGACTC AATTCGCACT TCTTATTCTT GCTGACGTGA ATAATTCTTT AGCTAAAAGA TACGAAAATT TACAGAATAC AGAAGGGCTT GAATACGATG TTTTAGCAAC AGACACGTTA CTATATATGC TTACTTATCA ATCATTAATA TCAAAGTATG GTACTCGATG GTTATTTGGT GGACGGTTAG ATAATAATAT TGGAAAACCG TCTTTATTTC TTATTGAAAA AGTAAATCAA CATTTTGAAG ACGATACATT AACGGCGTTA GTGAATCAGT TAAAACCTCA ATCGAAACAA TATCAAGATT TATACACACG ATTATATCGT TATTATGATC CTTATCATCA AGAAGCCCCA AAACTATATT CCTCACGATT ATTGAAACCG AATCAAGACA TTCCATATAA ATCACTTGTA TATAGATTGC AAATATCAGG GGAATTAAAT GAAGAACAAA TCCACTATTT TTTGAGCCAA GAAGGGGATA AATATAATAA TGAATTAGTT AATGTGGTTA AGTCATTTCA AAAACGACAT GGTTTAGTCG TGGATGGTAT TGTCGGTAAG AGAACATTGT ATTGGCTAAA TATGAGTGCG AATGAACGTG TACGAATTAT GGCATTAAAT ATTCAGCGTT TACGTTTATG GGAAAATAAG AACGCTCGAT TTGTTCTCGT AAATATACCT TCTTATGAAA TGGGGTATTG GTTGAAAGGT GAGCTTGTTT TTAAAAGTAA AGTGATCGTA GGTAAGCCCG AAAGAAAAAC CCCGCTCTTT ACTACTCGAT TAGACTCCAT CGTATTTAAT CCTAATTGGA AAGTGCCAAC AAAGATAATG AAGGAGGATA TCCTACCAAA AGCCCTTGAG AATCAAGACT ATTTATTAAC GCATAATTAT GAAGTGCTTC CATCTTGGTT AAGTGATGAA GTGATTCCTT TTGAAAGCAT TGAATGGGAG ACAATGACCG TTGATAATTT TCCTTATAAA TTAAGACAAA AGTCGGGCAA CGCAAATGCA TTAGGTCGCT ATAAATTTAA TACACCAAAC CGTAATGCTA TCTATCTGCA TGATACTCCA TCACGATCTT TATTTAATAA ACAACATCGT GCTTACAGTT CAGGGTGTAT ACGGGTAGAG AAAGCGTCAG AATTTGCACA ACTTTTAATG AAAGAATCGC ATTTTACCGC GAAAGATTAT GCAGGCTATC ATCGATTACC AAAAACAAAT ACGGTAGGGT TATCGCAAAA AATAGCGGTA TATACCATTT ATCAAACCGC GTGGGTAGAT GAAGCGGACA CCATTCAATT TAGAAATGAC GTATATCGAT ATGATGAATG GAGTAAGAGT AAAAATTGA
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Protein sequence | MSRYIVFFTL LFCYFPLSAQ TEDADTYIRK HQGSLYYASD VSRLYPNSQR KWNRAEDRKE IETQFALLIL ADVNNSLAKR YENLQNTEGL EYDVLATDTL LYMLTYQSLI SKYGTRWLFG GRLDNNIGKP SLFLIEKVNQ HFEDDTLTAL VNQLKPQSKQ YQDLYTRLYR YYDPYHQEAP KLYSSRLLKP NQDIPYKSLV YRLQISGELN EEQIHYFLSQ EGDKYNNELV NVVKSFQKRH GLVVDGIVGK RTLYWLNMSA NERVRIMALN IQRLRLWENK NARFVLVNIP SYEMGYWLKG ELVFKSKVIV GKPERKTPLF TTRLDSIVFN PNWKVPTKIM KEDILPKALE NQDYLLTHNY EVLPSWLSDE VIPFESIEWE TMTVDNFPYK LRQKSGNANA LGRYKFNTPN RNAIYLHDTP SRSLFNKQHR AYSSGCIRVE KASEFAQLLM KESHFTAKDY AGYHRLPKTN TVGLSQKIAV YTIYQTAWVD EADTIQFRND VYRYDEWSKS KN
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