| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1326 |
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| Symbol | |
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| ID | 6987004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1437217 |
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| End bp | 1438626 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379686 |
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| Product | putative amidohydrolase |
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| Protein accession | YP_002262785 |
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| Protein GI | 209694857 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.183481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTAA GAAAATCACT GCTTGCTGTC GCTATTGCCG CAGGCTCATT ATTTTCGTTT
TCGGCAAGTT CAGCGCAACA AGTTGACTTG ATGATTACTG ATGCAACGTT ACTAACAATG
AACGATTCGA AAGAGACATT TGAGAATGGT GTTGTCGTTA TTTCTGGTAA TAAAATTATT
GCTGTGGGCG ACAAAAGCAT AGCCTCTAAA TATGCCGCAA AAACGGTATT AGACGTCGAT
GGTGATATTG TTTTACCGGG TTTAATTAAC ACACATACAC ACGCTTCTAT GACCGTTTTT
CGTTCATTAG GTGATGACGT TCTAGATCGT TTACACCGTT ATGTCTTCCC TTTAGAGAAA
AAGTTAGTGT CACGCGATAT GGTTCGTATT GGTGCTAATT TAGGAAATGT AGAAATGGTA
AAAGGGGGCG TTACCACTTA TGCTGATATG TACTACTTTG AAGATGAAGT CGCGAAAACG
GTTGATAAAA TTGGCATGCG TGCAATTCTA GGTGAAAGTG TCATTAAATT TCCAGTAGCA
GATGCTGCTA ATGCAGAAGA AGGGATTCAA TACGCAGTAA ACTTTATTGA AGAATATAAA
GATCACCCAC GCATTACGCC AGCTTTTGCT CCACATGCGC CATACACCAA TACAACCGAA
GTACTGCAAA AGATTGCTAA ATTATCGTTA GAGTTGGATG TTCCGGTAAT GATCCACCTA
GCTGAATCTC ATCGTGAAGA AGAAGTGATT GCAGAACGTG CGAACGGCAT GTCTCCAGTA
GAATATATGC ATAGTATTGG TGCGCTTAAT AAAAACCTTA TTGGTGCACA CATGATTTTG
ATTGATGATA AAGACATTGA ACTAGTAAAA GAATCAGACA TGGGTGTTGC TCATAATATG
AGTGCAAACA TCAAATCAGC AAAAGGGGTA TCTCCTGCGC TTAAAATGTA TGACGAAGGT
GTTCGTATTG GTTTAGGAAC GGATGGGCCA ATGTCAGGCA ATACGCTAAG TATTATTGAT
GAGTTCAACC AAGTCGCTAA AGTACACAAA TTAGTGAATA AAGATCGAGC CGCCATGCCT
CCAATCAAAG TGATTGATAT GGCGACAATG GGCGCTGCGA AAGCGCTTCA TATGGAAGAT
AAAATTGGTT CTATCGAAGT AGGAAAATTA GCGGATATCA TTGTTGTTGA TACCAAAGCA
CCGAACATGT TGCCAGTATA TAACCCATAT TCTGCATTGG TTTACTCTGC AAATTCAAGC
AATGTTCGTC ATACGATTGT TGATGGCAAA ATATTGATGA AAGATCGTGA AATGCTGACG
GTTGATGAAG AGCAGATCAG GCAGGAAGTG CTCGAGTTTA CCAAGATTGT ACGTAAAACG
GTTATTGAAA GTGGTGAAAT TGTTCAATAA
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| Protein sequence | MYLRKSLLAV AIAAGSLFSF SASSAQQVDL MITDATLLTM NDSKETFENG VVVISGNKII
AVGDKSIASK YAAKTVLDVD GDIVLPGLIN THTHASMTVF RSLGDDVLDR LHRYVFPLEK
KLVSRDMVRI GANLGNVEMV KGGVTTYADM YYFEDEVAKT VDKIGMRAIL GESVIKFPVA
DAANAEEGIQ YAVNFIEEYK DHPRITPAFA PHAPYTNTTE VLQKIAKLSL ELDVPVMIHL
AESHREEEVI AERANGMSPV EYMHSIGALN KNLIGAHMIL IDDKDIELVK ESDMGVAHNM
SANIKSAKGV SPALKMYDEG VRIGLGTDGP MSGNTLSIID EFNQVAKVHK LVNKDRAAMP
PIKVIDMATM GAAKALHMED KIGSIEVGKL ADIIVVDTKA PNMLPVYNPY SALVYSANSS
NVRHTIVDGK ILMKDREMLT VDEEQIRQEV LEFTKIVRKT VIESGEIVQ
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