| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1319 |
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| Symbol | |
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| ID | 6986997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1430200 |
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| End bp | 1431882 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643379679 |
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| Product | membrane receptor, histidine kinase |
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| Protein accession | YP_002262778 |
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| Protein GI | 209694850 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTGG TGTTTTCCCT TTTACAGCAA TTAAGCGTTT ATCTTGTTCT TGCTTACCTA
TTAAGTAAAA CGCCTTTATT TCTTCCTATT ACGACGATTT CTGGTCGTTG GAGTCACCGC
TTCCTTTGCT ACATCATTTT TTCTGGCTTC TGCATTTTAG GCACGTATTT TGGACTCGCT
ATTCAAGATG CCATCGCAAA TACCCGTGCG ATTGGTGCCG TTATGGGCGG TGTATTAGGT
GGGCCTTTAG TTGGTTTTTT AGTTGGACTC ACAGGAGGAT TACATCGCTA TTCTATGGGT
GAATTTACCG ATTTAGCCTG TGCAATATCA ACGACGGCAG AAGGACTATT AGGTGGTTTG
TTTCATTTAT ACTTTCTGAG AAAGAATCAA ATAGACCAGT TGTTTAGACC AAGAACGGTC
TTAATGATCG CCTTTATCGC TGAATTACTT CAAATGGCGA TCATTCTCAT CGTTGCAAAG
CCATTTGACC AAGCTTATGT ACTCGTTTCA TCTATCGTTT TACCGATGAT TGTTGCTAAC
TCTATTGGTG CAGCCATGTT CATGAGTATT ATCCAAGATA GAAAAGCAAT TTACGAAAAA
TATTCTGCCG CTTTCTCTAA TAAAGCACTG AATATTGCAC AACGTTCAGT GGGTATTTTA
AGCCAAGGCT TTAACCAAGA AAACAGCGAA CAAATTGCTA AAATAATTTA TGAAGAAACA
GGGGTTGGTG CTGTTTCGAT TACCGATAAA GAAAAAATAT TGGCTTTTAT TGGTATCGGT
GATGATCACC ATTTGCCGGG AACCCCTATT GCCTCAGATT ACACACGAAA AGCAATTATA
CAAAGCAAGG TGATGTACAT TGATGGGGAT GAGCACCCTT ACCAATGCTC AATTAATGAC
AAATGCAAGT TAGGTTCAGC CTTAGTTATC CCACTCATTG GTGTAAATAA TGAGGTAATT
GGAACCATTA AACTGTATGA ACCGAAACGT AAATTATTTT CCTATATCAA CCTTACGTTG
GGTGAAGGTA TTGCTAAACT GCTCTCAAAC CAAATTCTTG CGGGACGATA TTTACAACAA
CAGACCTTAT TAACTCAAGC TGAATTACGG TTATTGCAAG CTCAAGTGAA CCCCCACTTC
CTATTTAATG CATTAAATAC CATCAGTGCA GTTATTCGTC GCGACCCAAA TAGAGCAAGA
GAACTTATTC AGCATTTATC TCAATTTTTC CGCCGAAATT TAAAACAGAA CTTTGAGCAA
GTCACCTTAA AAGAAGAGTT ACATCACGTA CAATCTTATC TAGAGATTGA GCTCGCCCGT
TTTGCTGACC GATTAACCGT AAATATGGAC ATTGATGAAC GTTTATATTC ATTAAAGCTG
CCCACTTTTA CGTTGCAGCC GCTAGTTGAA AATGCCATCA AGCATGGAAC GTCAAATATG
TTTGAAGAGG GAGAAATTAC AATTAAAGCC TATCTTTCTC ATCACCAAGT CATTTTAGAA
GTTATCGATA ATGCCGGGTT ATACATAGAA CAAGAAAACA GCGATGGATT AGGAACGAAC
ATTGTTGATA AACGTTTAAA AAATCAATTT GGTGATGCCT TTGGATTAAC AATGTCCTGC
ATTGAAAACC AACAAACCAA AGCCACTATT CATTTGCCAG TAGAGACTAT TACTCATGCT
TAA
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| Protein sequence | MELVFSLLQQ LSVYLVLAYL LSKTPLFLPI TTISGRWSHR FLCYIIFSGF CILGTYFGLA
IQDAIANTRA IGAVMGGVLG GPLVGFLVGL TGGLHRYSMG EFTDLACAIS TTAEGLLGGL
FHLYFLRKNQ IDQLFRPRTV LMIAFIAELL QMAIILIVAK PFDQAYVLVS SIVLPMIVAN
SIGAAMFMSI IQDRKAIYEK YSAAFSNKAL NIAQRSVGIL SQGFNQENSE QIAKIIYEET
GVGAVSITDK EKILAFIGIG DDHHLPGTPI ASDYTRKAII QSKVMYIDGD EHPYQCSIND
KCKLGSALVI PLIGVNNEVI GTIKLYEPKR KLFSYINLTL GEGIAKLLSN QILAGRYLQQ
QTLLTQAELR LLQAQVNPHF LFNALNTISA VIRRDPNRAR ELIQHLSQFF RRNLKQNFEQ
VTLKEELHHV QSYLEIELAR FADRLTVNMD IDERLYSLKL PTFTLQPLVE NAIKHGTSNM
FEEGEITIKA YLSHHQVILE VIDNAGLYIE QENSDGLGTN IVDKRLKNQF GDAFGLTMSC
IENQQTKATI HLPVETITHA
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