| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1298 |
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| Symbol | |
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| ID | 6986977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1408058 |
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| End bp | 1408648 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643379661 |
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| Product | putative lipoprotein |
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| Protein accession | YP_002262760 |
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| Protein GI | 209694832 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
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| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.41074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA GTGTTGTTGC ATTATTAGGC TTAGCTGTAC TACTTGGTGG TTGTTCTAAT
AAAGTAAGTT ACGGTGATGC TCAAGCTGTT GAAACAACAA CGGTTGACTT TGGCTCGACT
GATTTGCAAA AAATTGCCGG TGAAATGACA GAAAGCATGC TTTCATCTGG CTCTGTAGCA
CAAATCACTC AAGGTAATCG TCCAATTGTT TTTGTTGAAA GCATTAAAAA CAAAACAAGC
GAGCACATTG ATACAGAATC AGTAACTGAC TCAATCAGTA CTAAATTGCT TAACTCTGGT
AAATTCCGTT TTGTTGATAT GGATCGTGTA GAAGCGGTTC GTACGCAACT GAATTTTCAA
AATACGGATG AGCTAGTAAA TCAAAATACT GCGATTCAAT TCGGTAAAAT GGTTGGTGCT
CAATACATGC TTTACGGTAA CCTTTCTAGC ATCGTGAAAA ATGCAGGTAG CGATAAAGAC
GTATATTACA AAATGACAAT GCGTTTAATG GATTTAGAAA CAGGTCTGAT CGAATGGGCT
GATGAAACTG AAATCCGTAA GCAACAAGAG AAAAGCCTAT TAGGTTGGTA A
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| Protein sequence | MKKSVVALLG LAVLLGGCSN KVSYGDAQAV ETTTVDFGST DLQKIAGEMT ESMLSSGSVA
QITQGNRPIV FVESIKNKTS EHIDTESVTD SISTKLLNSG KFRFVDMDRV EAVRTQLNFQ
NTDELVNQNT AIQFGKMVGA QYMLYGNLSS IVKNAGSDKD VYYKMTMRLM DLETGLIEWA
DETEIRKQQE KSLLGW
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