Gene VSAL_I1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1231 
Symbol 
ID6986917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1341374 
End bp1342474 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content39% 
IMG OID643379604 
Productextracellular solute-binding protein 
Protein accessionYP_002262703 
Protein GI209694775 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.196544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATG AGAAAAGGGG TTTCCGTCAT TGTGTTATTT CAATGGTTAT TTTCGTGGCG 
GCGATGATTG GAGGAATAGA AAAAAGCCAA GCGAATACTG AGCTCAAAGT AGGGACATAT
CATTGCCCAC CGTTTATCTT TCACGACAAA GGTCAAGAGT TTGAAGGCCT AAGCATGACG
TTATGGGAAC GTATTGCTGA GATCATGGGC GCGACTTATA CCTTACAGAA CTACGAACTT
GATGATTTGT TGTTAGCCTC AGAAAAAGGC GACATTGACG TTGGGATATC GTGTATCTCT
ATCACGCCTG ATCGTGAGGC TCGGGTCGAT TTCTCTCATT CTTTCTACGA AACGCATCTG
GCTATTGCGG TGAAAAGCCG TAGCTATTTC GATACGTTTA TTAGCATTGT CACTAACCCG
ACTTTATGGA AAGCGATAGG TATTTTTTTC ACTGTTGCGA TTAGCGTCGG TGGGTTCTTT
TATTTGTTAG AACGAAAAAA TAATGACAAA TTATATTCAA TGCCAACCAA GAAAGGTCGC
TTGGCAGAAG CGTTGATCTT AGGGGTTTTA TTCATCACAA AAGGTCCTTT TAATTACTTT
GAATTTAAAA CCTTATCAGC ACGAGTGATG ACGGTATTGA TCGCAATGTT CTCCACAGTA
TTCATTGCCA GTATCACCGC TATTTTGACC AGTTCACTCA CATTAGAGCA ATTAAGATTT
GATGTGAAAA ACGTGAATGA TTTATCTAAG CTCAGAACAG GTGCAAAGCA AGCCACAACG
GCATCACTCT TATTGGCTGA TCACAGCATT GCTCATGAAA ATTATCAAAC CATGGATGAG
TTATTATTGG CATTAGAGAA TGATCAGGTT GATGCTATTG TGGCGGATGA TGCGGTATTA
CGGTACATGA TAAAACAAGG TAAAAATAAG CAATTGTTTA ACGAATTAGT CGTACTTCCT
TATCAGTTAG AAAAACAAAA TTATGGCCTA GTGTTAATTG AAAACAGTGA ATACGAAGAA
GAGATCAATC GGGCTTTATT ACAAATTCGT GAAACGACAG AGTGGCATCA GATCTTGTTA
GAGTATTTTA CTGAGAAGTA G
 
Protein sequence
MFDEKRGFRH CVISMVIFVA AMIGGIEKSQ ANTELKVGTY HCPPFIFHDK GQEFEGLSMT 
LWERIAEIMG ATYTLQNYEL DDLLLASEKG DIDVGISCIS ITPDREARVD FSHSFYETHL
AIAVKSRSYF DTFISIVTNP TLWKAIGIFF TVAISVGGFF YLLERKNNDK LYSMPTKKGR
LAEALILGVL FITKGPFNYF EFKTLSARVM TVLIAMFSTV FIASITAILT SSLTLEQLRF
DVKNVNDLSK LRTGAKQATT ASLLLADHSI AHENYQTMDE LLLALENDQV DAIVADDAVL
RYMIKQGKNK QLFNELVVLP YQLEKQNYGL VLIENSEYEE EINRALLQIR ETTEWHQILL
EYFTEK