Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1231 |
Symbol | |
ID | 6986917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1341374 |
End bp | 1342474 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643379604 |
Product | extracellular solute-binding protein |
Protein accession | YP_002262703 |
Protein GI | 209694775 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.196544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATG AGAAAAGGGG TTTCCGTCAT TGTGTTATTT CAATGGTTAT TTTCGTGGCG GCGATGATTG GAGGAATAGA AAAAAGCCAA GCGAATACTG AGCTCAAAGT AGGGACATAT CATTGCCCAC CGTTTATCTT TCACGACAAA GGTCAAGAGT TTGAAGGCCT AAGCATGACG TTATGGGAAC GTATTGCTGA GATCATGGGC GCGACTTATA CCTTACAGAA CTACGAACTT GATGATTTGT TGTTAGCCTC AGAAAAAGGC GACATTGACG TTGGGATATC GTGTATCTCT ATCACGCCTG ATCGTGAGGC TCGGGTCGAT TTCTCTCATT CTTTCTACGA AACGCATCTG GCTATTGCGG TGAAAAGCCG TAGCTATTTC GATACGTTTA TTAGCATTGT CACTAACCCG ACTTTATGGA AAGCGATAGG TATTTTTTTC ACTGTTGCGA TTAGCGTCGG TGGGTTCTTT TATTTGTTAG AACGAAAAAA TAATGACAAA TTATATTCAA TGCCAACCAA GAAAGGTCGC TTGGCAGAAG CGTTGATCTT AGGGGTTTTA TTCATCACAA AAGGTCCTTT TAATTACTTT GAATTTAAAA CCTTATCAGC ACGAGTGATG ACGGTATTGA TCGCAATGTT CTCCACAGTA TTCATTGCCA GTATCACCGC TATTTTGACC AGTTCACTCA CATTAGAGCA ATTAAGATTT GATGTGAAAA ACGTGAATGA TTTATCTAAG CTCAGAACAG GTGCAAAGCA AGCCACAACG GCATCACTCT TATTGGCTGA TCACAGCATT GCTCATGAAA ATTATCAAAC CATGGATGAG TTATTATTGG CATTAGAGAA TGATCAGGTT GATGCTATTG TGGCGGATGA TGCGGTATTA CGGTACATGA TAAAACAAGG TAAAAATAAG CAATTGTTTA ACGAATTAGT CGTACTTCCT TATCAGTTAG AAAAACAAAA TTATGGCCTA GTGTTAATTG AAAACAGTGA ATACGAAGAA GAGATCAATC GGGCTTTATT ACAAATTCGT GAAACGACAG AGTGGCATCA GATCTTGTTA GAGTATTTTA CTGAGAAGTA G
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Protein sequence | MFDEKRGFRH CVISMVIFVA AMIGGIEKSQ ANTELKVGTY HCPPFIFHDK GQEFEGLSMT LWERIAEIMG ATYTLQNYEL DDLLLASEKG DIDVGISCIS ITPDREARVD FSHSFYETHL AIAVKSRSYF DTFISIVTNP TLWKAIGIFF TVAISVGGFF YLLERKNNDK LYSMPTKKGR LAEALILGVL FITKGPFNYF EFKTLSARVM TVLIAMFSTV FIASITAILT SSLTLEQLRF DVKNVNDLSK LRTGAKQATT ASLLLADHSI AHENYQTMDE LLLALENDQV DAIVADDAVL RYMIKQGKNK QLFNELVVLP YQLEKQNYGL VLIENSEYEE EINRALLQIR ETTEWHQILL EYFTEK
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