| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1216 |
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| Symbol | |
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| ID | 6986904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1324485 |
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| End bp | 1324712 |
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| Gene Length | 228 bp |
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| Protein Length | 75 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643379590 |
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| Product | putative HTH-type transcriptional regulator |
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| Protein accession | YP_002262689 |
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| Protein GI | 209694761 |
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| COG category | [K] Transcription |
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| COG ID | [COG3655] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.893532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCATTC GTATAAATTT AGATGTCATG ATGGCGAAGC GAAAAATGCG CCTAAAGCAC
TTGGCCCAAG AAGTTGGGAT CACAGAAGCA AATTTGTCTA TCTTAAAAAA TGGGAAAGCA
AAGGCTGTTC GTTTAGCGAC ATTGGATAAA CTGTGTGAAA TTCTTGAATG TCAGCCAGGC
GATATATTGG AATATGTGGT GGACTTGGAT AGTAAAACAA CCGATTAA
|
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| Protein sequence | MTIRINLDVM MAKRKMRLKH LAQEVGITEA NLSILKNGKA KAVRLATLDK LCEILECQPG
DILEYVVDLD SKTTD
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