Gene VSAL_I1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1198 
Symbol 
ID6988580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1306260 
End bp1308137 
Gene Length1878 bp 
Protein Length625 aa 
Translation table11 
GC content42% 
IMG OID643379573 
Productprobable membrane permease 
Protein accessionYP_002262672 
Protein GI209694744 
COG category[R] General function prediction only 
COG ID[COG2985] Predicted permease 
TIGRFAM ID[TIGR01625] AspT/YidE/YbjL antiporter duplication domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTG ATCAATTGAG TAACGTCTTT CACTGGATGA AGTCTCAACG CCGGACTTTA 
TTACTTACTC TGTCACTTTT TCTCTTCTCT AGTCGCCTTA TGGCTGCCGA ATCGGTTGAA
GCGTTAGCGC AACATGAAGC CTCTGGATTA TTTGGTTTTT TGTTTACGTA TATCGCCCAC
AATCCTTTTG TGTTTCTTTT CTTAAGCATT GCCATTGGCT ATCCTTTAGG AAAAGTAACG
ATTAAAGGCA TCAACTTAGG TTCAACGGCG GGTACTCTGG TTGTTGGTGT TGGTATCGCG
TTAACCGCTT TCTCTGTTTA TGGTTTACAT ATTGATGCGC CGGGTTTGGT GTCTGATATC
TTCTTAATGA TGTTCATGTA CGCTATTGGT ATGAAAGTAG GACCACAGTT TTTCTCTGGA
TTGGCACGAG GAGGAATAGA CTTTGTTGTT ATTGGTCTTA TTGTCGTGTT CAGTAATTTC
CTAATTGTTT TCTTTGGTTC TAAATTACTG GATTTAGCAC CGGGTTATGC GGCAGGGATT
ATTTCTGGAA GTTACACTGT AACTGCCGTG ATGGGCGTAG CTCAATCTGC CATTAATTTA
GGGGCAGTTA AAGCACCTGC AGGAATGACG CTTGATCAAA TCAGTGCCAA CATAGCCGCG
GGTTATGCCA TTAGTTATAT TCTTTCTAGT GTCTTCATTA TTTTACTTAT TAAATACCTA
CCTGCGATGT TTGGTATTGA TCCGGTGAAA GCGGGTAAAG ATGCTGAAGC CGATTTTGGT
GCGGGTGGTG ATACAGAAGC ATTACCAAGC ACGAATGGAT TCTCAAATTT AGGGGTTCTT
CCTCTAGATA TTCGAGCGTA CAGAGTTGAT CACCAAGAAT TAGTTGGACA GAATGTAGAA
GCGTTATTTC ATCGTTATCC CCATGCTGCG ATCCTTAAAG TCGTTCGTGG TGATGAGGTG
TTTGATGCGG TAGATAACCC ACAACTTCAA CTTGGAGATG TCATCGGTAT CCGAGGTGAC
TACCATGTAT TAATCGAAGG CGGCGAATCT ACGGTTGGTG TTGAAGTTGA TGAGCCTAGA
GCGCGTAATG TTGATATCGA AGTTGCCGAT ATTCATTTAG GTAAATCAGC CTACACAAGC
AAAACCATCG AAGAAATGAG TAAAGAAGTT GGTTTTGGTA TCTACATGAA AGCGGTGTTT
AGACAAGGGC ATCAGTTACC GATGTTACCT CAAACCGTGG TTGAAGTCGG TGATGTTATT
CGTGTCGCTG GTTCTGATTG GTGTGTTAAA CAAGCTGCTA AAAAACTGAA CAGTAATCCG
ATTGTTGAGA GTACGCTAAC AGAAACATTC TATTTGGCGC TTTCTTTGTT AATTGGTTAT
GTGTGTGGAC ACTTAAGTGT GACCTTTAGT GGCATTCCAT TTGCATTAGG AACCTCTGCG
GGCTGTATGC TTACAGGAAT CATCTTTTCG TTCTTGAGAA CTCGCAATCC CGCCTTTGGT
GGACCAATGA GTGAGGGCGC GCGTAGCTTC TTACAAGATA TTGGTTTGAG CTTGTTTGTT
GCAGTATTAG CAGCAGCAGT AGGCCCTAAA ATATTGGCGT CATTCCAAGG TATTGTAGTG
ATTAAGATTG CAGGCTTAGG TTTATTGGCA GCGTTACTTC CACCATTGTT GGCTTGGATT
TATGGTTTAT ATTTCCGCAA AATGAACCCT GCGATCCTTG CTGGTGCATG TGCTGGTGCT
CGTAATAGTA CACCTGCAAT GAAAGGCGCT CAGGATGAAT GTCAAAGTGA TATGCCTGCG
GTAGGCTATC CGGTTCCTTA TGCGTTAACG TCTATGATAG TACTGGTTTT AGGTTACCTA
ACCATGGTCT TATACTAA
 
Protein sequence
MNIDQLSNVF HWMKSQRRTL LLTLSLFLFS SRLMAAESVE ALAQHEASGL FGFLFTYIAH 
NPFVFLFLSI AIGYPLGKVT IKGINLGSTA GTLVVGVGIA LTAFSVYGLH IDAPGLVSDI
FLMMFMYAIG MKVGPQFFSG LARGGIDFVV IGLIVVFSNF LIVFFGSKLL DLAPGYAAGI
ISGSYTVTAV MGVAQSAINL GAVKAPAGMT LDQISANIAA GYAISYILSS VFIILLIKYL
PAMFGIDPVK AGKDAEADFG AGGDTEALPS TNGFSNLGVL PLDIRAYRVD HQELVGQNVE
ALFHRYPHAA ILKVVRGDEV FDAVDNPQLQ LGDVIGIRGD YHVLIEGGES TVGVEVDEPR
ARNVDIEVAD IHLGKSAYTS KTIEEMSKEV GFGIYMKAVF RQGHQLPMLP QTVVEVGDVI
RVAGSDWCVK QAAKKLNSNP IVESTLTETF YLALSLLIGY VCGHLSVTFS GIPFALGTSA
GCMLTGIIFS FLRTRNPAFG GPMSEGARSF LQDIGLSLFV AVLAAAVGPK ILASFQGIVV
IKIAGLGLLA ALLPPLLAWI YGLYFRKMNP AILAGACAGA RNSTPAMKGA QDECQSDMPA
VGYPVPYALT SMIVLVLGYL TMVLY