Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1190 |
Symbol | |
ID | 6986881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1296672 |
End bp | 1297286 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643379565 |
Product | putative fumarylacetoacetate hydrolase |
Protein accession | YP_002262664 |
Protein GI | 209694736 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.43938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACGA TTCGTATTGG AGAAAAACGA ATTACACCAA GTAAATTGTT ATGCGTTGGC CGGAATTATC ATGCTCATAT CAATGAACTA AACAATGCGG TTCCTGAGCA AATGGTCGTG TTCAATAAAC CCAATTCTTG CATTAGCTCT ACGCTGTCTT CTTTTCACCA AGAAACATTA CATTATGAAG CTGAAATCTG TTTTTTAATC GAGAATGGAC AACTGTCTGC AGTGGCTGTT GGGCTTGATC TAACTAAGCG TGAGTTACAA TCTTATCTAA AAAAGAAAGG ATTACCGTGG GAAAGAGCAA AAGCGTTCAA TGGCTCAGCC CTATTTAGTC GCTTTATTCC CTTAGACACG ATTGATATTA ATGCACTTCA AATTGAACTG TTTATAAATA GCATGCGCGT ACAATGCGGC AACGTAAGCC AAATGATTTA TTCTCCAGAA GCCATCCTTA CAGACCTACA AAGTTATACT CAATTATATG ATGGAGATGT GATCATGAGT GGAACGCCAC AAGGCGTAGG CGAAATCCAC TGCGGTGATA TTTTTCTTAG TCGCTTAAAA TCAGGCGATA AAACCCTAAT AGAAACGGAA TGGGTCGCAA GGTAG
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Protein sequence | MNTIRIGEKR ITPSKLLCVG RNYHAHINEL NNAVPEQMVV FNKPNSCISS TLSSFHQETL HYEAEICFLI ENGQLSAVAV GLDLTKRELQ SYLKKKGLPW ERAKAFNGSA LFSRFIPLDT IDINALQIEL FINSMRVQCG NVSQMIYSPE AILTDLQSYT QLYDGDVIMS GTPQGVGEIH CGDIFLSRLK SGDKTLIETE WVAR
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