| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1171 |
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| Symbol | vasQ-1 |
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| ID | 6988639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1274890 |
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| End bp | 1275399 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643379547 |
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| Product | putative type VI secretion protein VasQ-1 |
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| Protein accession | YP_002262646 |
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| Protein GI | 209694718 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.242549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTTTGA ATTCACAACA TAAGCGTGTT AGTAAAAACC GTGTAAGTAT TACTTATGAT
GTTGAAACAA ACGGCGCGGT AGAAACCAAA GAATTACCAT TTGTTGTTGG TGTTATTGGC
GATTTTTCTG GACATAAATC AGAATCAGAA AAAGTTGATT TAGAAGAGCG CGAATTTACA
AGTATTGATA AAGATAATTT CGATATGGTA ATGGGTCAAG TCGCCCCAAC GCTCTCTTAT
AAAGTTGATA ATAAATTAGC GAGTGATGAA AGCCAATTTG AAGTGAATAT GAATTTCAGC
TCAATGAAAG ATTTTCATCC TGAGAGCGTG GTAGAACAAA TAGATCCATT GAAGAAGTTA
GTAGAAACTC GTAATCAACT TAAAGTGCTA TTAAGTAAAG CGGATCGTTC TAGAGATCTT
GAGCGATTAC TAAAAGAAAT CCTACAAAGT ACAGATGCAA TTCAAGGTTT AGCGCAAGAA
TTGGGTCTGA ATAACGAAGG AGCTGAATAA
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| Protein sequence | MALNSQHKRV SKNRVSITYD VETNGAVETK ELPFVVGVIG DFSGHKSESE KVDLEEREFT
SIDKDNFDMV MGQVAPTLSY KVDNKLASDE SQFEVNMNFS SMKDFHPESV VEQIDPLKKL
VETRNQLKVL LSKADRSRDL ERLLKEILQS TDAIQGLAQE LGLNNEGAE
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