| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1168 |
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| Symbol | vasV-1 |
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| ID | 6989399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1272188 |
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| End bp | 1272484 |
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| Gene Length | 297 bp |
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| Protein Length | 98 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643379544 |
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| Product | putative type VI secretion protein VasV-1, PAAR domain protein |
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| Protein accession | YP_002262643 |
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| Protein GI | 209694715 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4104] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.173375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTACCAG CAGCTAGAGC AACCGATATG CATATGTGTC CAATGCAAAC GCCTGTCGTT
GTACCTATTC CACATGTAGG AGGCCCTTTA TTACCTTTTC CTACAACTGT CCTGATTGGT
AGTTTACCTG CGGCTACTTT AGGGCAGATG TGTATTTGCA TAGGGCCGCC TGACAGTATA
ATTAAAGGCA GTGCAACAGT ATTAATTAAT AATAAACCAG CAGCTCGTAT GGGAGATATG
ACTGCGCATG GTGGAACAAT AATTATGGGA ATGCCAACAG TGCTGATTGG TGGTTAA
|
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| Protein sequence | MLPAARATDM HMCPMQTPVV VPIPHVGGPL LPFPTTVLIG SLPAATLGQM CICIGPPDSI
IKGSATVLIN NKPAARMGDM TAHGGTIIMG MPTVLIGG
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