Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1155 |
Symbol | |
ID | 6989330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1256941 |
End bp | 1257786 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643379533 |
Product | hypothetical protein |
Protein accession | YP_002262632 |
Protein GI | 209694704 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.405335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATAG ACCTACATAG TCACACAACT GCGTCAGATG GACGCTTATC ACCGACAGAA TTAGTAGAAA GAGCGGTGAA TTTTGATGTT AAAGTTTTTG CTATTACCGA TCACGATACG GTTGCTGGTT TAGCTGAGGC CCATAAAGCG ATAAAAGAGA AAGATCTGCC ATTGCATTTA ATTGATGGCA TTGAGATCTC TACGCTGTGG AGCAATAAAG ATATTCACGT CGTGGGGTTG AATTTAGATA TTAATCATCC TGAATTATTA GCGTTAATTG AGCAACAAGA AGCTCGCAGA ATTGCGCGTG CAGAGAAAAT GGCTGAGCGT CTAGAAAGAG CGGGTTATCC CGGAGCTCTG GAAGGGGCAA AAGCACTTGC TAACGGTGGG ACTTTAACTC GTGCTCATTT TGGTAAATGG TTGGTTGATC AAGGTTACGC AAAAACCATG CAAGCGGTTT TTAAAAAATT CTTAACTCGA AACAATATTG GATATGTTCC ACCAGAGTGG TGTTCTATTG AAGAAGCGGT TGAGGTAATA CATAACGCAG GAGGGAAGGC AATATTAGCC CACCCAGGCC GCTATAATTT AACTGCAAAA TGGATTAAGC GTTTACTTGC TGCTTTTGTT GAAGCAAAAG GGGACGCGAT GGAAGTCGCT TTACCACAGC AAGGGGTTCA AGAGCGCCGA GTACTTGCTG ATTACGCGAT TCATTTTGAC TTATTAGTGT CACAAGGTTC GGATTTCCAT TATCCATCCC CGTGGACCGA ATTAGGCCGA AATTTATGGT TACCAGCAGG GGTTGTTCCT GTATGGCAAG ATTGGGCTTT ACCTACATTT GAATAG
|
Protein sequence | MKIDLHSHTT ASDGRLSPTE LVERAVNFDV KVFAITDHDT VAGLAEAHKA IKEKDLPLHL IDGIEISTLW SNKDIHVVGL NLDINHPELL ALIEQQEARR IARAEKMAER LERAGYPGAL EGAKALANGG TLTRAHFGKW LVDQGYAKTM QAVFKKFLTR NNIGYVPPEW CSIEEAVEVI HNAGGKAILA HPGRYNLTAK WIKRLLAAFV EAKGDAMEVA LPQQGVQERR VLADYAIHFD LLVSQGSDFH YPSPWTELGR NLWLPAGVVP VWQDWALPTF E
|
| |