Gene VSAL_I1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1143 
Symbol 
ID6986865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1245165 
End bp1246130 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content41% 
IMG OID643379522 
Producthypothetical protein 
Protein accessionYP_002262621 
Protein GI209694693 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAG AAGCATTAGA TACGTTATTT ACGCATCTTG AACAGCAACT GACTCAGCCA 
TTAGGTGAAC TACGCCGCTT ATTTCATGGT CGTGGTCAAT GCTTTGAAGG ATTAGAGCAA
ATCACGGTAG ATTGGCTGCA AGCGAAAGAC TCTCAGGGGC AAGGCTCTCA AGGTCAACTA
GTGGTGGCGT TATTTAAAGA GCAAGACCTT GAATTTGTAG AAGAGTTAGA AGCTAGACTA
AAAGCATTTG CAGATTCCGA GTTATGGACG AATGCGAAAG GGTCTTCTAT CTTATTGCAA
CATCGTTACC AAGAATTAGC GCCAACACAA GTGGTATGGG GAGACGAAAA TACGTTTCCT
GTCGTTGAAG AAAACGGTTT AAAGTACCAA CTAGAGCTAA AAAAGAACCA GAATATGGGT
ATCTTTTTAG ACATGCGTTA TGGTCGTCAG TGGGTTCAAG CACATAGCGA AGGCAAGTCA
GTATTAAACT TGTTTGCATA TACGTGTGGT TTCTCTGTGG CTGCGATTGC TGGTGGTGCC
ACTCAAGTGG TTAACCTAGA TATGGCGAAA GCGTCATTAG GTCGTGGGCG TGATAACCAT
CGCCTAAATG AACATGATCT TTCTAAAGTG AAATTCTTAG GCCATGACAT ATTTAAGTCA
TGGGGAAAGA TTAAGAAATT GGGTTTGTAT GACTTGATCA TTATTGATCC GCCAAGTTTT
CAAAAAGGCA GTTTTGCGTT AACTAAAGAC TATCAAAAGA TCTTACGTCG CCTACCTGAT
TTGTTAACAG AAAATGGAGA GGTATTGGCG TGTGTGAATT CACCGGCAGT ATCAACGGAT
TTCTTAACTG ATGGTATGGC AGAAGAAGCA CCAGAGTTGA AATATATTGA GCGTTTAGAT
AATCCACCTG AGTTTGCTGA TATTAATCCT GAAAGTGGGT TAAAAGTGAT GCGATTTACT
CGCTAA
 
Protein sequence
MKIEALDTLF THLEQQLTQP LGELRRLFHG RGQCFEGLEQ ITVDWLQAKD SQGQGSQGQL 
VVALFKEQDL EFVEELEARL KAFADSELWT NAKGSSILLQ HRYQELAPTQ VVWGDENTFP
VVEENGLKYQ LELKKNQNMG IFLDMRYGRQ WVQAHSEGKS VLNLFAYTCG FSVAAIAGGA
TQVVNLDMAK ASLGRGRDNH RLNEHDLSKV KFLGHDIFKS WGKIKKLGLY DLIIIDPPSF
QKGSFALTKD YQKILRRLPD LLTENGEVLA CVNSPAVSTD FLTDGMAEEA PELKYIERLD
NPPEFADINP ESGLKVMRFT R