| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1134 |
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| Symbol | hisD |
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| ID | 6988665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1237380 |
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| End bp | 1238675 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643379513 |
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| Product | histidinol dehydrogenase |
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| Protein accession | YP_002262612 |
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| Protein GI | 209694684 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0141] Histidinol dehydrogenase |
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| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCC TAGTTTGGCA ATCACTCAGT AATTCACAAC AAGACACCGT CTTACAGCGT
CCTGCTATTA CCGAAGGCGC AAATATTACC GCTGCGGTAA CTAGCGTGAT TAATACCGTT
AAACAAGATG GCGATGCTGG CGTGTTAGCG TTGACTGAAA AGTTTGATAA GGTGAAACCT
GAATCCATTC GTGTATCTAA ATCAGAGATT GATGCGGCAA GTGAACGTTT ATCTGAAAAG
ATGAAAGCGG CACTGCAACA AGCTTATAGC AATATTTCTA AGTTTCATAA AGCACAAAAG
CCTCAGCCAA TCAAAGTTGA AACTCAACCT GGTGTCGTAT GTGAACAAAT CACGATGCCA
GTGAATAAAG TCGGCTTGTA TATTCCGGGT GGCAGTGCAC CATTGCCTTC AACAGTATTA
ATGTTAGGCA TTCCTGCACA GATTGCGGGC TGTCATAAAG TGGTACTTTG TTCGCCACCG
CCGATTGCTG ATGAGATCTT ATACGTTGCA AAACTATGTA AAGTCGATGA GGTGTATAAC
ATTGGTGGCG CACAAGCGAT TGCTGCTATG GCGTATGGTA CTGAATCTGT TTCTAAAGTA
GATAAGATCT TTGGCCCAGG TAACGCATAC GTCACTGAAG CAAAACGCCA AGTTTCTAAT
GACTTTCGTG GTGCTGCTAT TGATATGCCT GCGGGACCTT CTGAAGTCTT GGTTATTGCG
GATGAAACGG CTGATCCTGA TTTTATTGCG GCAGATCTTC TTAGCCAAGC TGAACATGGT
CCTGATTCAC AAGTTATCTT AGTCACGCCT TCGCCAATCA TCGCTGATCA AGTTGCTGAT
GCCATCGAGA AGCAATTAAA AGAACTGACT CGTGCGGATA TCGCTCGTCA AGCGCTAGGT
TCTAGTTTGT TGATTATTGC TAAATCATTG ACGCAATGTG TTTCAATCTC AAACTTTTAT
GGTCCTGAGC ACTTGATTGT TCAAACTAAA AACCCACGTG AATTATTACC ATTGCTAGAT
AATGCAGGTT CTATTTTCTT GGGTGAGTAT TCTCCAGAAT CAGCAGGGGA TTATGCATCG
GGTACAAACC ATGTTTTACC AACTTATGGT TATACAAGAA CGCACTCAAG CTTAGGTTTA
GCTGATTTTT CTAAACGCAT GACAGTACAA GAGTTAACTG CTGATGGTTT AAAAGGGTTA
GCGCCAACGG TTGTCACAAT GGCTGATGCT GAAGGGCTAG ATGCACATAA ACGTGCCGTG
ACTATTCGAA TTGAAAAATT AGCTAAATTG AATTAA
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| Protein sequence | MKTLVWQSLS NSQQDTVLQR PAITEGANIT AAVTSVINTV KQDGDAGVLA LTEKFDKVKP
ESIRVSKSEI DAASERLSEK MKAALQQAYS NISKFHKAQK PQPIKVETQP GVVCEQITMP
VNKVGLYIPG GSAPLPSTVL MLGIPAQIAG CHKVVLCSPP PIADEILYVA KLCKVDEVYN
IGGAQAIAAM AYGTESVSKV DKIFGPGNAY VTEAKRQVSN DFRGAAIDMP AGPSEVLVIA
DETADPDFIA ADLLSQAEHG PDSQVILVTP SPIIADQVAD AIEKQLKELT RADIARQALG
SSLLIIAKSL TQCVSISNFY GPEHLIVQTK NPRELLPLLD NAGSIFLGEY SPESAGDYAS
GTNHVLPTYG YTRTHSSLGL ADFSKRMTVQ ELTADGLKGL APTVVTMADA EGLDAHKRAV
TIRIEKLAKL N
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