| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1120 |
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| Symbol | vasG |
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| ID | 6989383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1221520 |
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| End bp | 1222449 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643379500 |
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| Product | putative type VI secretion protein VasG |
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| Protein accession | YP_002262599 |
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| Protein GI | 209694671 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0273687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGCCT TAGATCACGT TTGTCATCAA CTTATTCAAT ACCATCCTTG GTCTTATGAT
GAAGCCTATG ATCGTATTCA ATTCATCGCA AATCCATCAC AAGGCTTTGC ACCAAGAGAG
ATACAAACCG TGACCGTTCT CATGCAGGAC GATGGTCTAC CAAAAGTACT CTTAACGCTT
AATATGCTAT CGCTGATTGG GGCTTCATCA CCTCTGCCTC ATTATTATAA TGATTATTTA
CAACAAGATG AAAACAACAT CATCAAACCA TTTTTAGATA TTTTCCACCA CCGCTTACAT
CGCCTTATCC GTAGTGTCTG GCAAAAATAC CGCTACAACG CTGCTTTTCG CAAAGGCGCT
AATGATCCTT TTTCTCAGCA TATTTTTGCA TTATTGGGAT TAAAAAGTGA AGAGCTACGC
GATGATGATT CAATCAATTG GTCTCGATTA TTTCCATACT TAGGGTTACT CAGCCAACGA
GTTCGATCGG CAAATACCAT TGAAGGCCTA CTTCGTTATT ACTTTCAACA CCCAAATATA
CACATTGAAG AGTGCATTCT ACGCCATTGT AAAATTCCGA ATCAGCAGCA ATGCACATTA
GGAAATACAA ACTCCTTACT CGGAGCCGAT GTTGTTCTTG GTGACAGCAC GCCAGATCGT
GCAAACAAAT TTAGAATTCA TATAACTGAA TTAACTTGGG ATCATTTTCA TTCATTTTTA
ACCAATAAAC CAAACTGGAT CACATTAAAT CGCTTAGTTC GATTCACTGT AAAAGATCCG
CTAGATTTCG ATATTCAACT TCATTTAAAA AACGATGAAC CCCGTCCATT AACGCTATCA
GAAAGTAATG AATGCTGTCT GGGTTGGACA AGTTGGCTCG GCTCAAAACC AAATGAAGGA
CGCATAACAC TTTCAGGGAA GACATTATGA
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| Protein sequence | MKALDHVCHQ LIQYHPWSYD EAYDRIQFIA NPSQGFAPRE IQTVTVLMQD DGLPKVLLTL
NMLSLIGASS PLPHYYNDYL QQDENNIIKP FLDIFHHRLH RLIRSVWQKY RYNAAFRKGA
NDPFSQHIFA LLGLKSEELR DDDSINWSRL FPYLGLLSQR VRSANTIEGL LRYYFQHPNI
HIEECILRHC KIPNQQQCTL GNTNSLLGAD VVLGDSTPDR ANKFRIHITE LTWDHFHSFL
TNKPNWITLN RLVRFTVKDP LDFDIQLHLK NDEPRPLTLS ESNECCLGWT SWLGSKPNEG
RITLSGKTL
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