| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1114 |
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| Symbol | vasF |
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| ID | 6989389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1213243 |
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| End bp | 1214070 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643379495 |
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| Product | putative type VI secretion protein VasF |
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| Protein accession | YP_002262594 |
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| Protein GI | 209694666 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCA TGGATGACCG CACGGTACTT ATTACCCAAG ATCCAAATCA AGTTAGCCCT
ACGTTAACTC AGAGCCCCAA TGCCCCAAAG TTTGATCAAT TACAAAATCG AATGGTGTAT
GCCGCTCGTA TCAAACCTGA AGAGTACAAC TTTGCTGGCA ACAATCCACT GATTAGCGCC
GCATCGTCTT TGCTTTGTAT TACGTGTGAT TTAAAGAAAG AAACGTATCA AGATATAGAT
CTACTCAAGC CTAAATTAGT CGAAGAAATT AAATCATTTG AATTCCAAGC TTTAAATTCA
GGCGTTGAGA ATAACTACGT CGCACTATCC CGCTATTTAC TGTGCTCTTT TATTGATGAA
GTGGTTGTTA CTACACCTTG GGGAGCCGAA AGCCACTGGG CATCACAAAG TATGCTTAGT
AGCTTTCACA ATGAAACCTA TGGCGGTGAG AAGTTTTTTC TGTTGCTTGA AAAGCTAAGT
CGAAATCCAG CTAAGTATTT AGAATTATTA GAGTTAATGT ATTTATGCTT AAGCTTAGGT
TTTGAAGGTA AATACCGCGT TTTATCCCGA GGTTTAATTG AATTAGACGC CATTCGAGAT
TCTTTATACC GCCAAATTCG ATCGTTACGT GGTGATGAGA AATCAAGTCT TTCGCCAAAT
TGGGAGCCTA AACAAGTGCA ACGACATAAG CTGACAAGAC AAACATCATG GGTAGGCATT
GTCTGCGTAG TTCTGTTTTC TTTATGTGCT ATCTATGGTG GTTTTTACTA TGTATTAGAC
CAGCAATCAG CTCACGTTAT TCAAGCATTT GAACACATTG AATTATAG
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| Protein sequence | MSSMDDRTVL ITQDPNQVSP TLTQSPNAPK FDQLQNRMVY AARIKPEEYN FAGNNPLISA
ASSLLCITCD LKKETYQDID LLKPKLVEEI KSFEFQALNS GVENNYVALS RYLLCSFIDE
VVVTTPWGAE SHWASQSMLS SFHNETYGGE KFFLLLEKLS RNPAKYLELL ELMYLCLSLG
FEGKYRVLSR GLIELDAIRD SLYRQIRSLR GDEKSSLSPN WEPKQVQRHK LTRQTSWVGI
VCVVLFSLCA IYGGFYYVLD QQSAHVIQAF EHIEL
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