| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1109 |
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| Symbol | |
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| ID | 6986853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1206727 |
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| End bp | 1207227 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643379491 |
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| Product | hypothetical protein |
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| Protein accession | YP_002262591 |
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| Protein GI | 209694663 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AAGGCTTCAC TTTGATAGAA CTTATCATTG TAATTGTAGT TTTAAGTATC
TTAGCAATTA CTGCAGCATC AAAATTTATA AACCTTCAAC GTGATTCTCG AATTTCAGCG
CTACAAGGGC TAAAAGGAGA AATGACTGGA GCAATGAACC AACTACATCC AAAAACAATT
CTTACAGGAG TTGACACTCA AGCAAGCGGG TCTATAACAA TACTTGGTGA TAATATTCAC
ATTGTATATG GTTACCCAAA AGCCGATGCA GCCAAATCTT GGAATAAACT AATGAATCAA
GTTTTTGTTG ATTCTCAATA CAATGACAAT ATTCCATCTG AATGGTATTT TCATAATGAC
ACTAGTAAAC CCTATATTAC TTTCATGCAC AGAAGTAAAA AATACAGTAC TGATAAGTGT
AATATTAAAT ACAGTGAAGC GGTAAATAGA CTGCACTCCT TTAGGTACAT GGAGTGGTGC
CACTGTTTAC AATGGTGGTG A
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| Protein sequence | MKKKGFTLIE LIIVIVVLSI LAITAASKFI NLQRDSRISA LQGLKGEMTG AMNQLHPKTI
LTGVDTQASG SITILGDNIH IVYGYPKADA AKSWNKLMNQ VFVDSQYNDN IPSEWYFHND
TSKPYITFMH RSKKYSTDKC NIKYSEAVNR LHSFRYMEWC HCLQWW
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