Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0990 |
Symbol | leuS |
ID | 6986764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1092574 |
End bp | 1095150 |
Gene Length | 2577 bp |
Protein Length | 858 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643379378 |
Product | leucyl-tRNA synthetase |
Protein accession | YP_002262481 |
Protein GI | 209694553 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0495] Leucyl-tRNA synthetase |
TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.300602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGAAC AATATAATCC ACAGGATCTT GAACAGAAGA TCCAAAAACA TTGGGACGAC AGCAAAACAT TTGTTGTCAC TGAAGACGCA AGCAAAGAAA AATTCTATTG CCTCTCAATG TTCCCATACC CAAGTGGTCG TCTACACATG GGTCACGTTC GTAACTACAC CATTGGTGAT GTGGTTTCTC GCTATCAGCG CCTGCAAGGC AAAAACGTAA TGCAACCTAT CGGTTGGGAT GCGTTTGGTC TTCCGGCTGA GAATGCGGCT GTTAAAAATA AAACAGCACC AGCCCCTTGG ACTTACGAAA ACATCGAATA CATGAAAAAC CAGCTTAAAC TATTAGGCTT TGGTTATGAT TGGAGCCGTG AATTCGCAAC GTGTACGCCA GAGTACTACC GTTGGGAACA AGAGTTCTTC ACAAAATTGT ACAACAAAGG CTTAGTTTAC AAGAAAACCT CTTCTGTAAA CTGGTGCCCA AATGACCAAA CAGTTCTAGC AAACGAACAA GTTGAAGACG GTTGTTGTTG GCGTTGTGAT ACCCCTGTTG AACAAAAGAA AATCCCACAG TGGTTCATTA AAATCACCGA GTACGCGCAA GAACTTCTTG ATGATCTAGA TACCCTTGAT GGTTGGCCTG ACATGGTAAA AACCATGCAA CGTAACTGGA TCGGCCGCTC AGAAGGCGTT GAATTATCTT TTGCTGTTAA CGGCGAAGAA GCACCTTTAG AAGTGTATAC CACCCGTCCT GATACGCTAA TGGGTGTTAC ATACGTTGGT ATCGCTGCAG GTCACCCTCT TGCAGAACAA GCCGCTGCAA AAAATCCAGA ATTGTTTGCT TTCACTGAAG AATGCCGTAA TACCAAAGTT GCAGAAGCAG AACTAGCAAC GATGGAAAAG AAAGGTATGG ATACAGGCTT ACGTGCTATC CACCCCCTTA ATGGTCGTGA AGTGCCAATT TATGTCGCAA ACTTCGTATT AATGGATTAC GGCACTGGTG CTGTAATGGC GGTTCCTGCT CACGATCAAC GTGACTACGA ATTTGCAACT AAATACGGTC TAGATATCAT CCCTGTAATC AAGCCAGAAG ATGGCTCTGA TGTTGATGTA TCTGACGTTG CTTACACAGA AAAAGGCGTT CTATTTGATT CTGGTGAATT CGACGGTCTT GCTTTCCAAG ACGCATTCGA TGCGATTGCT GCGAAACTAG AAGCAGAAGG TAAAGGCAAG AAAACGGTAA ACTTCCGTCT ACGTGACTGG GGTGTTTCTC GCCAACGTTA CTGGGGTGCC CCAATCCCAA TGGTAACCAC TGAAGACGGT GAAGTTCACC CAGTACCTGC GGATCAACTG CCCGTAATTC TTCCTGAAGA TGTGGTGATG GATGGCGTAA CTAGCCCAAT CAAAGCTGAT AAAGAATGGG CAAAAACAAC ATTCAACGGC GAACCAGCAC TGCGTGAAAC AGATACCTTT GATACCTTCA TGGAATCATC TTGGTACTAC GCACGTTACT GTTCTCCACA AGCTGACGAT ATTCTAGACC CAGAAAAAGC AAACTACTGG TTACCAGTAG ACCAATACGT TGGTGGTATT GAACACGCTT GTATGCACCT ATTGTACTCA CGTTTCTTCC ACAAGCTTTT ACGTGATGCT GGTTATGTCA CGTCAAACGA ACCATTCAAG CAACTTTTAT GTCAAGGTAT GGTGCTTTCT GATGCATTCC ACCACACCAA TGAAAAAGGC ACAAAAGAGT GGATCGCACC AACAGACGTT ACCATTGAAC GTGACGCTAA AGGTAGAATC GAAAAAGCAG TTGATGATCA AGGCCGTGAA GTTCAACACT CAGGCATGAT CAAAATGTCT AAATCTAAAA ACAACGGTAT TGACCCTCAA GAAATGGTTG ATAAGTTTGG CGCCGATACG GTTCGTCTAT TTATGATGTT TGCAGCACCT GCAGATATGA CACTAGAATG GCAAGAATCT GGCGTTGAAG GTGCAAGTCG CTTCCTAAAA CGTGTGTGGA AATTAGTACA CGAGCACACA ACAAAAGGCA CAACTGAAGC GTTAGATGTT GCCGCTCTTT CTGGTGACCA AAAAGCACTA CGCCGTGATG TTCATAAAAC AATTGCTAAA GTAAGTGATG ATATTGGCCG TCGTCAAACA TTCAACACTG CTATTGCTGC AATCATGGAA TTAATGAACA AGCTAAACAA AGCACCTCAA GGATCAGCAC AAGATCGTGC TCTTCTTGAT GAAGCATTGA AAGCCGTTGT TGTTATGCTT TACCCAATGA CTCCACACGC AAGTTTTGCG ATGTGGGAAG CATTAGGTGA ATCAAACATT GATACGACAG CATGGCCAAC ATTCGATGAG AAAGCACTGA TTGAAGATGA AAAAACAATC GTTGTTATGA TTAACGGAAA ATTACGTGCA AAATTAATTG TTGCTGCTGA TGCAACAGAA GAACAAGTGA AAGAGCTTGG TCTTAACGAT GAAAATGCAC TTAAATTCCT AGATGGCCTA ACTATACGTA AAGTTATCTA TGTTCCAGGT AAGCTTTTAA ACATCGTAGC TAACTGA
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Protein sequence | MQEQYNPQDL EQKIQKHWDD SKTFVVTEDA SKEKFYCLSM FPYPSGRLHM GHVRNYTIGD VVSRYQRLQG KNVMQPIGWD AFGLPAENAA VKNKTAPAPW TYENIEYMKN QLKLLGFGYD WSREFATCTP EYYRWEQEFF TKLYNKGLVY KKTSSVNWCP NDQTVLANEQ VEDGCCWRCD TPVEQKKIPQ WFIKITEYAQ ELLDDLDTLD GWPDMVKTMQ RNWIGRSEGV ELSFAVNGEE APLEVYTTRP DTLMGVTYVG IAAGHPLAEQ AAAKNPELFA FTEECRNTKV AEAELATMEK KGMDTGLRAI HPLNGREVPI YVANFVLMDY GTGAVMAVPA HDQRDYEFAT KYGLDIIPVI KPEDGSDVDV SDVAYTEKGV LFDSGEFDGL AFQDAFDAIA AKLEAEGKGK KTVNFRLRDW GVSRQRYWGA PIPMVTTEDG EVHPVPADQL PVILPEDVVM DGVTSPIKAD KEWAKTTFNG EPALRETDTF DTFMESSWYY ARYCSPQADD ILDPEKANYW LPVDQYVGGI EHACMHLLYS RFFHKLLRDA GYVTSNEPFK QLLCQGMVLS DAFHHTNEKG TKEWIAPTDV TIERDAKGRI EKAVDDQGRE VQHSGMIKMS KSKNNGIDPQ EMVDKFGADT VRLFMMFAAP ADMTLEWQES GVEGASRFLK RVWKLVHEHT TKGTTEALDV AALSGDQKAL RRDVHKTIAK VSDDIGRRQT FNTAIAAIME LMNKLNKAPQ GSAQDRALLD EALKAVVVML YPMTPHASFA MWEALGESNI DTTAWPTFDE KALIEDEKTI VVMINGKLRA KLIVAADATE EQVKELGLND ENALKFLDGL TIRKVIYVPG KLLNIVAN
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