Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0983 |
Symbol | |
ID | 6988385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1086079 |
End bp | 1086888 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643379371 |
Product | rare lipoprotein A |
Protein accession | YP_002262474 |
Protein GI | 209694546 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.327643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATTC TTCTACTGGT TATTTCTCTT ATTTTGGTTG GTTGTGCTTC TGAACCACCA ATAAAAAATA CAGATGAGCC TAATGCAGGG CGTTATCAAA TAGATAATGA TATTGCCCCA AATACCCCAA TTTCGGTGGA ACATATAGAA GATGCCCATC CTCGTTATGA ACCTAAAAGC TTATACGGCA ACAAAGACTA CACGTTATTA GGTAAAGACT ATCCTATTGT TCGAGATCCT AAAGGATTTA AGCAAGAAGG GAAAAGCTCT TGGTACGGCA ATAAATTTCA TGGTCATAAA ACCTCCAATG GTGAGATTTA TGATATGTAC TCAATGAGTG CTGCACACAA AACACTTCCG ATACCAAGCT ATGTAAAAGT CATCAATAAG GACAATGGAA AAACAGCCAT TGTTCGAGTA AATGATCGTG GTCCTTTCCA TGAAGGACGC ATAATAGATT TAAGCTTTGC TGCTGCCACA AAATTAGATG TGATAAAAAC GGGAACAGCC AACGTAAAAA TTGAATATAT TTCTATCGAT AAACCAACGA ATGCTCAGGA ATGGCACGCG ATCGATCCTA ATCAATATTA TATTCAAATG GTGGCAGTAA AAAGTGAACA AAGTGCCAAT TCAATAGCAA AAAAACTACA AACACAATTT AATGCACCGA CACATATTGT GAAATCAAAA TCGATTTATC GCGTTCGTCT GGGCCCGTTT ATTGACAGAG ATATTGCAGA TAAAACATTG CTCGATGCAA AAAATGGACA ATACACCTCA GCGTTTATCA TCCAAGAAGC AAAGAAATAA
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Protein sequence | MRILLLVISL ILVGCASEPP IKNTDEPNAG RYQIDNDIAP NTPISVEHIE DAHPRYEPKS LYGNKDYTLL GKDYPIVRDP KGFKQEGKSS WYGNKFHGHK TSNGEIYDMY SMSAAHKTLP IPSYVKVINK DNGKTAIVRV NDRGPFHEGR IIDLSFAAAT KLDVIKTGTA NVKIEYISID KPTNAQEWHA IDPNQYYIQM VAVKSEQSAN SIAKKLQTQF NAPTHIVKSK SIYRVRLGPF IDRDIADKTL LDAKNGQYTS AFIIQEAKK
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