Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0980 |
Symbol | lipB |
ID | 6988751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1083372 |
End bp | 1084058 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643379368 |
Product | lipoate-protein ligase B |
Protein accession | YP_002262471 |
Protein GI | 209694543 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.33716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCCTAT TGAACAAGCG TCTAGTAGTT AAAAACCTTG GCCGACAAGA TTATGAGCCG GTATGGAAAG CGATGCATAC CTTTACTGAC GAACGCGATG AAAACTCGTG TGATGAAGTA TGGTTAGTTG AGCACAATCC AGTATTCACT CAAGGACAAG CAGGTAAAGA AGAACATGTT CTGGCTGCTG GAGATATCCC TGTCGTAAAA AGTGACCGTG GCGGGCAAGT AACCTACCAT GGACCAGGTC AACTCGTCGC TTATGTTTTG ATTAACTTAC GCAGAAAGAA AATAGGTGTC CGTGAATTAG TCACACACAT TGAAAACACG GTAATCAACA CATTAAGTCA GTTTACTATT GAATCAGCAG CAAGACCTGA TGCTCCGGGT GTGTATGTTG ATAATAAAAA AATATGTTCT CTTGGTTTGC GTATCCGCAA AGGATGTTCA TTCCACGGAC TGGCACTAAA CGTAAACATG GATTTATCTC CTTTCCTAAG AATTAACCCT TGTGGTTATG CTGGAATGGA AATGATACAA CTGCACGATT TAATTAAAGA AAATGATACG GTAGAGAACA AAGCAGAACA CGTTGAAGAT GTTCACCCTT TACTTATTAA AGAATTAACA ACATTACTTG ATTACACTGA TATTGAGTAC ATAACGGAAA GCAGCCATCA TGAGTAA
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Protein sequence | MILLNKRLVV KNLGRQDYEP VWKAMHTFTD ERDENSCDEV WLVEHNPVFT QGQAGKEEHV LAAGDIPVVK SDRGGQVTYH GPGQLVAYVL INLRRKKIGV RELVTHIENT VINTLSQFTI ESAARPDAPG VYVDNKKICS LGLRIRKGCS FHGLALNVNM DLSPFLRINP CGYAGMEMIQ LHDLIKENDT VENKAEHVED VHPLLIKELT TLLDYTDIEY ITESSHHE
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