Gene VSAL_I0961 details

Gene Information

• Locus tag: VSAL_I0961
• ID: 6988226
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 1058250
• End bp: 1058786
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 643379352
• Product: hypothetical protein
• Protein accession: YP_002262455
• Protein GI: 209694527

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.352728
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACCA AATCAATAGA TTTAAACCAT TCTCTTTACA AAATCCTGAT TGAAGACCAA 
CTGGATAGCT TCTCAGTGTT AGAGCTAAGA GATGCATTTA TGAAATCCTC TGAGTTACTC 
CAAGATAAAG ATAATGTAAG GCGTTTTGTT TATCGTCATA TCTTACGTCT TGAAAGGATG 
CAGTTACTGG AGAGAGTTAT AGAAAAAACT TCCCAAAAAG CTAAATATCG AAAAACAGTC 
TTATTTTCTA AAGCAGTATG GAATACAGTC ATTGAAGAAA GAGCTCCTGA ATTAATAGAA 
CCTAAGCATC AGGAGGGAAG CTTCCTTTTT CCTAAAATGA CACTTCAAAA GCGGCTTGAG 
CAATGCGAAA GTGATTTTCT AGCATGTATT CATGAATTTG AAACCTATAA AAGCTTGTGT 
TCGGAATATC CTCATTTAGC GGATAGCTTA CTTGATGTCC AGGGTCAAAC TAAAACGCAG 
AGCTCCAAGC TTGTTGGTGA AATGCGAGCT ATTAAGATGG CTCTTACTTT ATCATGA 

 

Protein sequence

MTTKSIDLNH SLYKILIEDQ LDSFSVLELR DAFMKSSELL QDKDNVRRFV YRHILRLERM 
QLLERVIEKT SQKAKYRKTV LFSKAVWNTV IEERAPELIE PKHQEGSFLF PKMTLQKRLE 
QCESDFLACI HEFETYKSLC SEYPHLADSL LDVQGQTKTQ SSKLVGEMRA IKMALTLS