Gene VSAL_I0923 details

Gene Information

• Locus tag: VSAL_I0923
• Symbol: ribC
• ID: 6989098
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 1021757
• End bp: 1022413
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 643379317
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_002262420
• Protein GI: 209694492
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTACAG GAATTATTGA ATCAATCGGT ACACTTCAAG CCATCACGCC TAAAGGTGAA 
GATGTTAGTG TCACAGTTAA TGTTGGCAAA TTAGACATGG GCGATGTGAA ATTAGGCGAC 
AGTATTGCGA CTAATGGCGT TTGTCTAACC GTCGTAGCGA TGACAAAAAA TAGTTATACC 
GCTGATTTGT CTTTAGAGAC ATTAAAGCGT ACTGGTTTTG TCCATTATAA AGCAGGCGAT 
AAAGTCAATC TTGAAAAAGC GATGTTGCCG ACAACTCGTT TTGGTGGACA CATTGTCTCT 
GGCCATGTTG ATGCGGTAGG GGAAATAATT GAACGTCACC AAACAGGCAG AGCGGTCGAG 
TTTTGGATCC AATTACCTCA GGATTTAGCT AAATATGTGG TAGAAAAAGG CTCAATAACG 
ATCGATGGCA TCAGTTTGAC CGTGAATGAT TTACGTAAAA ATGCATTTAA ACTTACTATT 
GTGCCCCACA CTGCATCGGA AACAACGATG GATACATTCA CTGTTGGAAA AAAAGTGAAT 
CTAGAAGTGG ACTTAATTGC ACGATATTTA GAAAAACTTG TGATCGGACA GAAAGAAGAG 
CAACCTCAGT CTTCTGTTAC GATGGATCTT TTGGCAAAAT CAGGTTTTTT AAATTAA 

 

Protein sequence

MFTGIIESIG TLQAITPKGE DVSVTVNVGK LDMGDVKLGD SIATNGVCLT VVAMTKNSYT 
ADLSLETLKR TGFVHYKAGD KVNLEKAMLP TTRFGGHIVS GHVDAVGEII ERHQTGRAVE 
FWIQLPQDLA KYVVEKGSIT IDGISLTVND LRKNAFKLTI VPHTASETTM DTFTVGKKVN 
LEVDLIARYL EKLVIGQKEE QPQSSVTMDL LAKSGFLN