| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0911 |
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| Symbol | |
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| ID | 6986727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1010327 |
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| End bp | 1012282 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643379307 |
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| Product | putative ATP-dependent helicase |
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| Protein accession | YP_002262410 |
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| Protein GI | 209694482 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCTA AGATTTTTTC GTCATCAGGC GCGTTAGGAA AAGCGATTCC GGGTTTCCAA
CCTCGTCAAC CTCAATTAGA TATGGCTCAT GCGGTTCATG CTGCTATCAA AGATGGTACA
CAATTAGTGG TAGAAGCGGG TACGGGTACA GGAAAGACGT TTGCTTATCT TGTTCCTGCT
CTGATTAGTG GCAAAAAGAC CATTATCAGT ACGGGTTCTA AAAACTTACA AGAACAGCTT
TTTCATCGTG ATTTACCTTT AATGACATCT TCACTGGGTT TTTATGGTCA AGTGGCTTTA
TTAAAAGGAC GCTCAAACTA CCTTTGTCCA GAGCGTTTAA ACCAGCAATT AGTCGAAAGT
CATACTCCTC AAGCTGATCC TGAGTTATTA ACGCAACTTG TTAAGGTGCG TGCTTGGTCA
TCAGAAACAA AAACAGGGGA TCTTGGTGAT TGCACCGCGA TTGCCGAAGA CAGCCCGATA
ATTCCTTCAA TTACTTCCAC CAACGACAAC TGTTTAGGTA AAGATTGCCC GAGCTTTGAT
GAGTGTTTTG TGGTTAAAGC GCGAAAGAAA GCAATGGATG CTGATGTCGT GGTGGTGAAC
CATCATCTAT TTCTTGCTGA TTTAGCGATC AAAGAAACAG GTTTTGGTGA ACTGATTCCA
GAAGCCGATA TTTTTATTTT TGATGAAGCC CATCAATTAC CGGATATTGC GAGTCAATAT
TTTGGGCAAA ACCTATCTAG CCGCCAGTTG ACCGAATTAG CAAAAGACAT CGAAATTGGC
TATCGCACCG AAGCAAGAGA CATGCGCCAA TTGCAAAAAG TAGCAGAGCG TCTAGCGGGT
GCAGCAATGG ACTTACGTAT TGTATTAGGT GAACCCGGAT TTCGAGGTAA TTGGCGAGAG
GCCATTAAGT CGGCGGCGGT TCAACGTGAA ATTGTACGTA TAAATGATGC GTTTGAGCTG
GCTCATGATG TTTTGAAATT AGCATTAGGG CGTAGCCAGC TATTGGATGC CGCTTTTGAT
CGTTGTGCCT TATTAAAGAA TCGTCTAGAG CGTGTATGTG ATACCACGAT TGGTGGTTAT
TCCTATTGGT TTGAATGTAC TCCTCGTCAT TTTAGTTTGA ATATTACACC ATTGTCTGTC
GCTGATAAGT TTAAAGAACA AGTGGCAGAT AAAGAAGGGG CTTGGATATT TACGTCGGCA
ACACTGGGCG TAAATGATGA TTTTTCTCAT TTTACCGAGC GCTTGGGGTT GGAACCAACA
AAACAGTTTT CATTACCGAG TCCGTTTGAT TATCAAACTC AAGCGTTGTT GTGTGTTCCG
CGTTTTCTTC CTGAACCGAA CAGTCATGGT ATTGCGAATA AACTTGTGGA ATTACTGCTA
CCAGTGATTA AACAAAATAA TGGTCGGTGT TTCTTTTTGT GCACGTCACA TCAAATGATG
CGGGATTTGG CAGGACAGTT CAGAGAGATG TTAGATCTGC CGGTATTAAT GCAAGGTGAG
ACGACCAAGC AAAAATTGTT GGCGGAGTTT ATGGAACTTG GCAACGCGTT ATTGGTTGCT
ACAGGGGCTT TCTGGGAAGG TATTGACGTT AGAGGTGATG CGCTAAGCTG TGTTATCATC
GACAAACTTC CCTTTACTGC CCCTGATGAT CCGCTCTTGA AAGCGCGCAT TGAAGATTGT
CAGCTAAGTG GTGGTGACGC ATTTTCACAA GTACAAATAC CTGATGCTGT TATAACCTTA
AAGCAAGGGG TAGGACGATT AATTCGCGAT ACCAAAGACA AAGGGGTATT GATTATTTGT
GACAATCGTT TAGTTACTAG GCCTTATGGG GCTACGTTTC TACAAAGTTT ACCGCCGATA
CCAAGAACTC GAGATTTAAA AAATGTGTCT GAATTTTTAG CGAAAGCAGA TCAACATAAA
AAATTAGAGA AACAAGAAGT TATTTTAGAA AATTGA
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| Protein sequence | MIAKIFSSSG ALGKAIPGFQ PRQPQLDMAH AVHAAIKDGT QLVVEAGTGT GKTFAYLVPA
LISGKKTIIS TGSKNLQEQL FHRDLPLMTS SLGFYGQVAL LKGRSNYLCP ERLNQQLVES
HTPQADPELL TQLVKVRAWS SETKTGDLGD CTAIAEDSPI IPSITSTNDN CLGKDCPSFD
ECFVVKARKK AMDADVVVVN HHLFLADLAI KETGFGELIP EADIFIFDEA HQLPDIASQY
FGQNLSSRQL TELAKDIEIG YRTEARDMRQ LQKVAERLAG AAMDLRIVLG EPGFRGNWRE
AIKSAAVQRE IVRINDAFEL AHDVLKLALG RSQLLDAAFD RCALLKNRLE RVCDTTIGGY
SYWFECTPRH FSLNITPLSV ADKFKEQVAD KEGAWIFTSA TLGVNDDFSH FTERLGLEPT
KQFSLPSPFD YQTQALLCVP RFLPEPNSHG IANKLVELLL PVIKQNNGRC FFLCTSHQMM
RDLAGQFREM LDLPVLMQGE TTKQKLLAEF MELGNALLVA TGAFWEGIDV RGDALSCVII
DKLPFTAPDD PLLKARIEDC QLSGGDAFSQ VQIPDAVITL KQGVGRLIRD TKDKGVLIIC
DNRLVTRPYG ATFLQSLPPI PRTRDLKNVS EFLAKADQHK KLEKQEVILE N
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