| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0888 |
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| Symbol | metQ |
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| ID | 6988795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 990725 |
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| End bp | 991534 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643379289 |
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| Product | DL-methionine transporter substrate-binding subunit |
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| Protein accession | YP_002262392 |
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| Protein GI | 209694464 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTATTGA ACATAAAAAA ACTGGCAGCA ATAGCGGGTC TAGCATCAAC GCTTATTCTT
ACTGGTTGTG GCCAAGAAGA AACAAACACA AACCTAATTA AAGTAGGTGT AATGGCAGGT
GCTGAAGCAC AAGTCGCTGA AGTTGCAGCA AAAGTAGCAA AAGAGCAATA CGGTCTTGAT
GTTGAGTTAG TGACATTTAC CGATTACGTA ACACCAAACG CAGCATTAGA TGATGGTTCA
ATTGACTTGA ACGCATTCCA ACACAAACCA TACTTAGACC AACAAGTCGC TGACCGTGGT
TACAAAATTG AAGTTGCTGG TAATTCATTT GTTTACCCAA TTGCTGGTTA CTCTAAGCAA
GTAACTGCTG TTGACCAAAT TGAAGACGGT GCACGTATTG CGGTACCAAA CGATCCAACT
AATCTTGGCC GTTCTCTTCT TCTTCTTCAA GAACAAGGTC TAATCACATT ACGTGACGGT
TCAGGTCTTG CTGCAACGGT TCGTGATATT ACCGCTAACC CTAAAAACAT CACAATTGTT
GAGCTAGATG CGGCACAACT TCCTCGTTCT CTTGATGATG TGGCCCTGTC TGTAATCAAC
ACAACTTACG CAAGTAGCCT AAACCTTACA CCGGAAAAAG ACGGCATCTT TGTTGAAGAT
AAAGACTCTC CATACGTAAA CTTAATTGTT GGTCGTACTG ATAACGTAAA CACTGAAAAC
GTAAAGACTT TTGTTAAAGC TTACCAATCA GAAGAAGTTT ACCAAGCCGC TCTAAAAACA
TTTAAAGGTG GCGTAGTTAA AGGTTGGTAA
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| Protein sequence | MVLNIKKLAA IAGLASTLIL TGCGQEETNT NLIKVGVMAG AEAQVAEVAA KVAKEQYGLD
VELVTFTDYV TPNAALDDGS IDLNAFQHKP YLDQQVADRG YKIEVAGNSF VYPIAGYSKQ
VTAVDQIEDG ARIAVPNDPT NLGRSLLLLQ EQGLITLRDG SGLAATVRDI TANPKNITIV
ELDAAQLPRS LDDVALSVIN TTYASSLNLT PEKDGIFVED KDSPYVNLIV GRTDNVNTEN
VKTFVKAYQS EEVYQAALKT FKGGVVKGW
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