Gene VSAL_I0865 details

Gene Information

• Locus tag: VSAL_I0865
• ID: 6988609
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 966748
• End bp: 967356
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 643379267
• Product: putative ABC transporter permease
• Protein accession: YP_002262370
• Protein GI: 209694442
• COG category: [S] Function unknown
• COG ID: [COG1284] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAA TCAAACACAC TCACAAAGAA GATGTCATTG CGATTTTAAC AGGGACATTT 
TTAGTCTCTC AAGGGATCTT CTTTTTGCAA GCCGCTAATT TATTAACGGG CGGAACAACA 
GGCTTAGCAT TGCTGTTAAG CCAAATGACA GACATCAGTT TTGGGGTTTT ATACTTTGTA 
TGTAACCTCC CTTTTTATGC GCTAGCTTGG AATCGATTCG GTAAGAAGTT TGCACTAACA 
AGCTTAATTT CAGGTGCACT CGTTTCTATC ATGACCGATC ATCTAAATAT GATGATTTCA 
GTTGACCATA TTAATGATAT TTATTGTGCA GTTGCTGGCG GTTTATTGAT GGGGTTAGGT 
ATGCTGATAT TATTTAGACA CCGTTCAAGT CTTGGTGGCT TTAATGTCTT ATGTTTATTC 
ATTCAAGAGA AGTTTGGCAT TTCAGTAGGC AAGGTTCAAA TGGCAATTGA TTTCTGCATT 
TTAAGCGCCT CTTTCTTCTT TATTACGCCT TCGTTATTAC TGATTTCCGT TCTTGGTGCT 
ATCGTATTAA ACATTGTGCT TGCAATGAAT CACAAACCAA ATCGTTATAT TGTGACTTAC 
GGGTCGTAG 

 

Protein sequence

MEKIKHTHKE DVIAILTGTF LVSQGIFFLQ AANLLTGGTT GLALLLSQMT DISFGVLYFV 
CNLPFYALAW NRFGKKFALT SLISGALVSI MTDHLNMMIS VDHINDIYCA VAGGLLMGLG 
MLILFRHRSS LGGFNVLCLF IQEKFGISVG KVQMAIDFCI LSASFFFITP SLLLISVLGA 
IVLNIVLAMN HKPNRYIVTY GS