| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0864 |
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| Symbol | glyA |
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| ID | 6986692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 965183 |
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| End bp | 966433 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643379266 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_002262369 |
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| Protein GI | 209694441 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR01563] phage head-tail adaptor, putative, SPP1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAGC GTGATATGAA CATTGCAGAT TACGATGCAG ACTTGTTTGC AGCAATCCAG
GAAGAGACAG TACGTCAAGA AGAGCATATC GAGCTGATTG CTTCTGAAAA CTACACTAGC
CCACGAGTGA TGGAAGCTCA AGGTTCACAA CTAACAAACA AGTATGCTGA AGGTTACCCT
GGTAAGCGTT ACTACGGTGG CTGTGAGTTC GTTGATAAAG TGGAAACACT GGCTATCAAC
CGTGCATGTG AATTGTTTGG CGCAGAGTAC GCAAACGTAC AACCGCATTC AGGTTCTCAA
GCGAACAATG CCGTTTACAT GGCACTACTA AACGCTGGCG ATACCGTGTT AGGTATGAGC
CTTGCTCACG GTGGTCACTT AACTCACGGT TCTCCAGTAA ACTTCTCTGG TAAGCTTTAC
AACATCATTC CTTACGGTAT TGATGAAGCG GGTCAAATTG ACTACGAAGA AATGGAAGCG
CTAGCAATAG AACATAAACC TAAGATGATC ATCGGTGGTT TCTCTGCTTA CTCTCAAATT
TGTGATTGGG CGCGTATGCG TGAAATCGCA GACAAAGTTG GTGCTTACTT TTTCGTTGAT
ATGGCTCACG TAGCGGGTCT TATTGCTGCT GGTGTTTACC CTAACCCTGT CCCACACGCT
CACGTAGTAA CAACAACAAC GCATAAAACA TTGGCTGGTC CTCGTGGTGG TCTTATTCTT
TCTAACGAAG GCGAAGATCT TTACAAGAAA CTGAACTCAG CAGTATTCCC TGGTGGTCAA
GGTGGCCCTC TAATGCACGT TATCGCTGGT AAAGCGGTGG CATTTAAAGA AGCACTAGAA
CCAGAATTTA AAGAATACCA AGTTCGTGTT GTTGCTAATG CAAAAGCAAT GGTTGCAGAG
TTTCTTGCTC GTGGTTACAA CATCGTTTCA GGCTCTACTG AAAACCACTT GTTCTTGGTT
GATTTAATCG ACAAAGACAT CACTGGTAAA GAAGCCGATG CGGCTCTGGG TTCAGCTAAC
ATTACCGTGA ATAAAAACTC AGTACCAAAC GATCCACGTA GCCCGTTTGT TACTTCTGGT
ATCCGTGTTG GTTCTCCTTC AATTACTCGT CGTGGTTTCT CTGAAGAAGA CGCGAAGAAC
CTTGCTGGCT GGATGTGTGA CATTCTAGAC AACATGGGTG ATGAGTCTGT TATCGAAGCA
ACTAAAGCGA AAGTATTAGA AATCTGTAAG CGTTTACCTG TATACGCTTA A
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| Protein sequence | MLKRDMNIAD YDADLFAAIQ EETVRQEEHI ELIASENYTS PRVMEAQGSQ LTNKYAEGYP
GKRYYGGCEF VDKVETLAIN RACELFGAEY ANVQPHSGSQ ANNAVYMALL NAGDTVLGMS
LAHGGHLTHG SPVNFSGKLY NIIPYGIDEA GQIDYEEMEA LAIEHKPKMI IGGFSAYSQI
CDWARMREIA DKVGAYFFVD MAHVAGLIAA GVYPNPVPHA HVVTTTTHKT LAGPRGGLIL
SNEGEDLYKK LNSAVFPGGQ GGPLMHVIAG KAVAFKEALE PEFKEYQVRV VANAKAMVAE
FLARGYNIVS GSTENHLFLV DLIDKDITGK EADAALGSAN ITVNKNSVPN DPRSPFVTSG
IRVGSPSITR RGFSEEDAKN LAGWMCDILD NMGDESVIEA TKAKVLEICK RLPVYA
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