Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0855 |
Symbol | tyrS |
ID | 6986687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 952023 |
End bp | 953303 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643379259 |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_002262362 |
Protein GI | 209694434 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0162] Tyrosyl-tRNA synthetase |
TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00588538 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCAA CAAATGAATT ATTGCAGGAT TTAAAAGCTC GTGGGCTTAT TGCACAGTGT ACAGCAGATG AAGAACTTGC TGAGCACCTA TCTACAGACT GTCGTACTCT CTATTGTGGT TTCGATCCGA CAGCAGACAG CTTACATATT GGTAGCCTTG TTCCTCTTTT AGTGCTTAAA CGTTTTCAAC AAGCAGGTCA TAAGCCATTA GCGCTTGTTG GCGGTGCAAC TGGCCTAATT GGTGACCCAA GCTTTAAAGC GGCTGAGCGT CAATTAAATA CATCTGATGT TGTTGGTGAT TGGGTTAATA AAATCCGTGC ACAAGTGTCT GCATTTGTTG ATTTTAATGA ATCAAAAAAT GGCGCAGAAG TGGTGAATAA CCTAGATTGG ATTGGTGAAA TCAATGTAAT CGAATTCATG CGTGATATCG GCAAGCACTT CAGCGTAAAC TCAATGATTC AAAAAGAATC AGTGAAGCAG CGTATTGACC GTGAAGGTTC TGGTATTTCA TTTACTGAAT TCAGCTACAT GCTACTTCAA TCATACGATT TTGCTGCATT GAATAAAGCG AAAGAATGTA CGCTTCAAAT CGGTGGTTCT GATCAATGGG GTAACATTAC TGGCGGTATC GACCTAACTC GCCGTATGAA CCGTAATAAA GTATTTGGTT TAACGCTACC TCTAGTGACT AAATCCGACG GTACTAAATT CGGCAAAACA GAATCAGGTA CAATTTGGTT AGACCCAAGC AAAACGTCAC CATACGCATT CTTCCAATTC TGGTTGGGAA CAGCAGATGC TGATGTATAT GATTTCTTAC GTTTCTTCAC ATTCTTATCT GTTGATGAGA TTGCTGCTTT TGAAGAGAGT GACAAAAGTG TACAAGGTCG TCCTGCAGGC CAAGGTGTAC TAGCTAAAGA AGTGACTCGC TTAGTGCATG GTGAAGAAGG TTTAGCGTCT TCTGAGCGCA TTACAGCCGC GTTATTCTCT GGTGACTTAG CCTCTCTAAC TGAAACCGAT TTAGCACAAT TAGCACAAGA TGGTCTACCA ACGACTGAAC TTGAGGCTTC TGAGCAAACT ATCGTTGAAG TACTGACTCA ATCTGAACTA GCAAAATCAA ATAAGATGGC GCGTGAATTT ATTGGTAACG GTGCGGTTTC AGTGAATGGT GAAAAAGTGG CTGATGCTGA AGTGATTCTG AAAAAAGAAG ACGCATTATT CGGTAAATAC AGCGTAATTA AGCGTGGTAA GAAACTGTTT AACTTATACA TCTGGAAATA A
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Protein sequence | MTATNELLQD LKARGLIAQC TADEELAEHL STDCRTLYCG FDPTADSLHI GSLVPLLVLK RFQQAGHKPL ALVGGATGLI GDPSFKAAER QLNTSDVVGD WVNKIRAQVS AFVDFNESKN GAEVVNNLDW IGEINVIEFM RDIGKHFSVN SMIQKESVKQ RIDREGSGIS FTEFSYMLLQ SYDFAALNKA KECTLQIGGS DQWGNITGGI DLTRRMNRNK VFGLTLPLVT KSDGTKFGKT ESGTIWLDPS KTSPYAFFQF WLGTADADVY DFLRFFTFLS VDEIAAFEES DKSVQGRPAG QGVLAKEVTR LVHGEEGLAS SERITAALFS GDLASLTETD LAQLAQDGLP TTELEASEQT IVEVLTQSEL AKSNKMAREF IGNGAVSVNG EKVADAEVIL KKEDALFGKY SVIKRGKKLF NLYIWK
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