Gene VSAL_I0855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0855 
SymboltyrS 
ID6986687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp952023 
End bp953303 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content41% 
IMG OID643379259 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_002262362 
Protein GI209694434 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00588538 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCAA CAAATGAATT ATTGCAGGAT TTAAAAGCTC GTGGGCTTAT TGCACAGTGT 
ACAGCAGATG AAGAACTTGC TGAGCACCTA TCTACAGACT GTCGTACTCT CTATTGTGGT
TTCGATCCGA CAGCAGACAG CTTACATATT GGTAGCCTTG TTCCTCTTTT AGTGCTTAAA
CGTTTTCAAC AAGCAGGTCA TAAGCCATTA GCGCTTGTTG GCGGTGCAAC TGGCCTAATT
GGTGACCCAA GCTTTAAAGC GGCTGAGCGT CAATTAAATA CATCTGATGT TGTTGGTGAT
TGGGTTAATA AAATCCGTGC ACAAGTGTCT GCATTTGTTG ATTTTAATGA ATCAAAAAAT
GGCGCAGAAG TGGTGAATAA CCTAGATTGG ATTGGTGAAA TCAATGTAAT CGAATTCATG
CGTGATATCG GCAAGCACTT CAGCGTAAAC TCAATGATTC AAAAAGAATC AGTGAAGCAG
CGTATTGACC GTGAAGGTTC TGGTATTTCA TTTACTGAAT TCAGCTACAT GCTACTTCAA
TCATACGATT TTGCTGCATT GAATAAAGCG AAAGAATGTA CGCTTCAAAT CGGTGGTTCT
GATCAATGGG GTAACATTAC TGGCGGTATC GACCTAACTC GCCGTATGAA CCGTAATAAA
GTATTTGGTT TAACGCTACC TCTAGTGACT AAATCCGACG GTACTAAATT CGGCAAAACA
GAATCAGGTA CAATTTGGTT AGACCCAAGC AAAACGTCAC CATACGCATT CTTCCAATTC
TGGTTGGGAA CAGCAGATGC TGATGTATAT GATTTCTTAC GTTTCTTCAC ATTCTTATCT
GTTGATGAGA TTGCTGCTTT TGAAGAGAGT GACAAAAGTG TACAAGGTCG TCCTGCAGGC
CAAGGTGTAC TAGCTAAAGA AGTGACTCGC TTAGTGCATG GTGAAGAAGG TTTAGCGTCT
TCTGAGCGCA TTACAGCCGC GTTATTCTCT GGTGACTTAG CCTCTCTAAC TGAAACCGAT
TTAGCACAAT TAGCACAAGA TGGTCTACCA ACGACTGAAC TTGAGGCTTC TGAGCAAACT
ATCGTTGAAG TACTGACTCA ATCTGAACTA GCAAAATCAA ATAAGATGGC GCGTGAATTT
ATTGGTAACG GTGCGGTTTC AGTGAATGGT GAAAAAGTGG CTGATGCTGA AGTGATTCTG
AAAAAAGAAG ACGCATTATT CGGTAAATAC AGCGTAATTA AGCGTGGTAA GAAACTGTTT
AACTTATACA TCTGGAAATA A
 
Protein sequence
MTATNELLQD LKARGLIAQC TADEELAEHL STDCRTLYCG FDPTADSLHI GSLVPLLVLK 
RFQQAGHKPL ALVGGATGLI GDPSFKAAER QLNTSDVVGD WVNKIRAQVS AFVDFNESKN
GAEVVNNLDW IGEINVIEFM RDIGKHFSVN SMIQKESVKQ RIDREGSGIS FTEFSYMLLQ
SYDFAALNKA KECTLQIGGS DQWGNITGGI DLTRRMNRNK VFGLTLPLVT KSDGTKFGKT
ESGTIWLDPS KTSPYAFFQF WLGTADADVY DFLRFFTFLS VDEIAAFEES DKSVQGRPAG
QGVLAKEVTR LVHGEEGLAS SERITAALFS GDLASLTETD LAQLAQDGLP TTELEASEQT
IVEVLTQSEL AKSNKMAREF IGNGAVSVNG EKVADAEVIL KKEDALFGKY SVIKRGKKLF
NLYIWK