| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0818 |
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| Symbol | clpP |
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| ID | 6989297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 908532 |
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| End bp | 909155 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379222 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_002262326 |
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| Protein GI | 209694398 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0301161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTATC AAGAAAACAA TGCAATGCCT TCTATTATGG ATGCACTTGT TCCTATGGTT
GTTGAACAAA CTTCACGTGG TGAGCGTTCG TATGATATTT ATTCCCGTCT GTTAAAAGAG
CGCGTTATCT TTTTAACAGG TCAAGTTGAA GATCACATGG CCAACCTAGT TGTGGCACAG
TTGCTTTTCC TTGAGTCTGA AAACCCTGAT AAGGATATCT TCCTATATAT TAACTCTCCA
GGCGGCTCAG TTACTGCAGG TATGTCTATC TATGACACCA TGCAGTTTAT TAAGCCAAAT
GTAAGTACGG TATGTATGGG TCAAGCATGT TCTATGGGTG CTTTCTTACT TGCAGGTGGC
GCACCAGGTA AACGTTATGT ATTACCTAAT TCTCGTGTGA TGATTCACCA ACCACTTGGT
GGTTTCCAAG GCCAAGCATC TGATATTCAA ATTCATGCGC AAGAAATCTT AACGATTAAA
AAGAAATTGA ATACATTACT TGCTGAGCAT ACAGGCCAAC CATTAGAAGT GATCGAAAAA
GATACAGATC GTGATAACTT CATGGCTGCA GATGATGCAG TGAAATATGG TCTTGTAGAT
GCTGTGCTAA ATAAGCGTGA CTAA
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| Protein sequence | MSYQENNAMP SIMDALVPMV VEQTSRGERS YDIYSRLLKE RVIFLTGQVE DHMANLVVAQ
LLFLESENPD KDIFLYINSP GGSVTAGMSI YDTMQFIKPN VSTVCMGQAC SMGAFLLAGG
APGKRYVLPN SRVMIHQPLG GFQGQASDIQ IHAQEILTIK KKLNTLLAEH TGQPLEVIEK
DTDRDNFMAA DDAVKYGLVD AVLNKRD
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