| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0817 |
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| Symbol | tig |
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| ID | 6988646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 907133 |
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| End bp | 908431 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643379221 |
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| Product | trigger factor |
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| Protein accession | YP_002262325 |
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| Protein GI | 209694397 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.153407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGTTA CCGTTGAAAC TAAAGAAGGC CTAGAGCGCG TTCTAACTAT TACTGTTCCT
GCTGCAAACA TTGAAGATGC TGTAAATGCA GAGCTTCGTA ACATCGCTAA AAATCGTCGT
TTTGATGGCT TCCGTAAAGG TAAAGTTCCA ATGAAGATGG TTGCTAAAAT GTACGGCAGT
GCTGTTCGTC ACGATAAAAT GGGTGAAGTT ATGCAACGTC ACTTCATTGA AGCGATCGTT
AAAGACAAAA TCAACCCAGC AGGCGCTCCA ACATTTGCAC CAGTTGAATT TGCTGAAGGC
CAAGATTTAG TATTCACTGC AACATTTGAA ATCTACCCAG AAGTAACACT TCAAGGTCTA
GACAAAGTTG TTGTTGAGAA ACCACAAGTT GAAGTTAAAG ACGAAGACGT AGCAGAAATG
CTAGAAACGT TACGTAAGCA ACAAGCTACT TGGTCAGATG CTGACGTTGC GGCTGAAGAT
GGCACTCGCG CTACAATCAA CTTTGTTGGT TCTATCGATG GTGAGCTATT TGAAGGCGGA
AAAGCAGATA ACTTCCCTCT AGAAATGGGC CAAGGTCGTA TGATCCCTGG TTTCGAAGAC
GGTATCAAAG GTAAGAAAGC AGGCGACGAA CTAACTATCA ATGTTAACTT CCCTGAAGAT
TACCACGCTG AAAACCTAAA AGGTAAAGCT GCAGAATTTG CTATTACAGT AGTTAAAGTT
GAAGCTCGTG AACTTCCAGA AATGAACGAT GAGTTCGTAA CTAAGTTTGG TGCTCAAGGC
GGCGTTGAAG GTCTTAAAAC TGAAGTTCGT AAGAACATGG AGCGTGAATT AGCTCAAACA
GTTAAAAACA AGATCAAAGA ACAAGCAATC AATGGCCTAG TTGAACAAAA CAACATTGAC
GTACCTTCTG CTCTTATCGA TCAAGAAGTT CAAGTTTTAC GTCAACAAGC AGTTCAACGT
TTTGGCGGTA ACGCGGATTC AGCTCCTGAG CTTCCACGTG AATTGTTCGA AGAACAAGCT
AAGCGTCGTG TAGTTGTAGG TCTTCTTCTT GGTGAAGTAA TCAAAACTGA AGAACTAAAA
GCTGACGATG AGAAAGTAAA AGCACTTATC AACGAAATGG CTTCTGCTTA CGAAGATCCA
ACTGAAGTTG TTGCTTACTA CGAAGGCAAC GAACAAATGA TGAACAACAT GCGTAATGTT
GCTCTAGAAG AACAAGCGAT TGATGCTATT TTAGCTAAAG CGCAAGTTTC TGAAAAAGCG
GTTGGCTTTA ACGAACTAAT GAATCAACAA CCAGCTTAA
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| Protein sequence | MQVTVETKEG LERVLTITVP AANIEDAVNA ELRNIAKNRR FDGFRKGKVP MKMVAKMYGS
AVRHDKMGEV MQRHFIEAIV KDKINPAGAP TFAPVEFAEG QDLVFTATFE IYPEVTLQGL
DKVVVEKPQV EVKDEDVAEM LETLRKQQAT WSDADVAAED GTRATINFVG SIDGELFEGG
KADNFPLEMG QGRMIPGFED GIKGKKAGDE LTINVNFPED YHAENLKGKA AEFAITVVKV
EARELPEMND EFVTKFGAQG GVEGLKTEVR KNMERELAQT VKNKIKEQAI NGLVEQNNID
VPSALIDQEV QVLRQQAVQR FGGNADSAPE LPRELFEEQA KRRVVVGLLL GEVIKTEELK
ADDEKVKALI NEMASAYEDP TEVVAYYEGN EQMMNNMRNV ALEEQAIDAI LAKAQVSEKA
VGFNELMNQQ PA
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