| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0800 |
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| Symbol | ushA |
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| ID | 6986670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 887932 |
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| End bp | 889593 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643379205 |
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| Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
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| Protein accession | YP_002262310 |
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| Protein GI | 209694382 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAC GTCTTTCTCT TAAAACAGCG ATTGCTGCCG CATTACTTAC TACATTGGCT
GGTTGCGCTA CAACGTCTGA ACATGCGTGG CAAGAAGACA CTACGTATAA GTTAACTGTG
CTACATACTA ACGATAACCA TGGCCGCTTT TGGCAAAATA AATATGGTGA GTACGGTATG
GCAGCGCGTA AGACGTTGAT TGATGAATTA CGTGCCGATG TTCAAGCTGA AGGGGGGAGT
GTTTTACTTC TTTCTGGTGG TGATATTAAT ACCGGTGTAC CTGAGTCTGA TTTACAAGAT
GCAGAGCCTG ATTTTAAAGG CATGAATAAA ATTGGATATG ATGCGATTGC ATTAGGTAAC
CATGAATTTG ATAACCCATT AGATGTGCTT CAAAAGCAAA TAGATTGGGC TAAATTCCCA
ATGCTGTCTG CCAACATTTA TGATAAAGAA ACTGGTGAGC GCATGTATCA AGCTTACGAG
ATTTTTGAAA AGCAAGGCAT TAAAATTGCG GTTATTGGTT TCACGACAGA AGACACGGCT
AAAATTGGTA ACCCTGAATA CATCGGTGGT ATTGATTTCC GAGATCCAAA AGAAGAAGCA
AAGAAAGTCA TTGCTGAACT GAATGAATCA GAAAAACCCG ATCTTATTTT TGCAGTTACT
CACATGGGTC ACTATGAAAA TGGTCAACGT GGTATTAATG CACCAGGTGA TGTAGCACTT
GCTCGTTCTC TTGAATTAGG TGAGTTGGAT ATGATTGTGG GTGGCCACTC ACAAGAGCCT
GTTTGTATGG AAGGGGCGAA CGTTGTTAAA CAAAACTTTA AGCCTGGTGA CGAATGTCAA
CCTGATCAAC AAAATGGCAC TTGGATCGTT CAAGCTCATG AATGGGGCAA GTACGTAGGT
CGTGCTGATT TTGAATTCCG TAATGGTGAA TTGGAAATGG TGAGTTATAA CCTAATCCCG
GTTAACTTGA AGAAGAAAAT AAAAGTTGAT GGCAAAAGTG AGCGTGTCTT TATTCAAGAT
GAAATTGTGC AAGATCCTGA GTTATTGGCT TTCCTAACGC CTTACCAAGA AAAAGGTCAA
GGCCAGTTGA ATGTGAAAAT TGCAGAAACG AATGGAAAGT TAGAAGGTGA CCGTAATGTG
GTTCGTTTTG AGCAGACTAA CCTTGGGCGT TTAATTGCGA CTTCTCACAT GGTTCGTGCA
AAAGCCGATT TTGCGGTAAT GAATTCGGGT GGTGTACGTG ATTCGATTGA AATGGGTGAT
GTTACTTATA AAGATGTTCT AACGGTGCAG CCATTTGGTA ATATTGTTAG TTATGTTGAT
ATGAATCGCG CTGAAGTATT AGATTACCTA AATGTGGTGG CGACTAAACC AATCGATTCT
GGTGCCTATG CTCAGTTCGC AGGTATTAAA ATGACCGTTG AAGCCGGTAA AGTATCTAAC
GTATTCATTG GTGGTAAGCA ACTGCGTTTA GACAAAACGT ACCGTTTTAC TATTCCAAGC
TACAACGCCG CGGGTGGTGA TGGTTACCCT AAAGTGTCGG GTCATTCGGG TTATGTAAAT
ACGGGCTTTG TTGATGCCGA AGTATTAAAA GAGTTTTTAG AAACAAATAG CCCAATTGAT
GTGAATGAAT TCGCACCACG TGGTGAAATT GTTTATAAGT AA
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| Protein sequence | MMERLSLKTA IAAALLTTLA GCATTSEHAW QEDTTYKLTV LHTNDNHGRF WQNKYGEYGM
AARKTLIDEL RADVQAEGGS VLLLSGGDIN TGVPESDLQD AEPDFKGMNK IGYDAIALGN
HEFDNPLDVL QKQIDWAKFP MLSANIYDKE TGERMYQAYE IFEKQGIKIA VIGFTTEDTA
KIGNPEYIGG IDFRDPKEEA KKVIAELNES EKPDLIFAVT HMGHYENGQR GINAPGDVAL
ARSLELGELD MIVGGHSQEP VCMEGANVVK QNFKPGDECQ PDQQNGTWIV QAHEWGKYVG
RADFEFRNGE LEMVSYNLIP VNLKKKIKVD GKSERVFIQD EIVQDPELLA FLTPYQEKGQ
GQLNVKIAET NGKLEGDRNV VRFEQTNLGR LIATSHMVRA KADFAVMNSG GVRDSIEMGD
VTYKDVLTVQ PFGNIVSYVD MNRAEVLDYL NVVATKPIDS GAYAQFAGIK MTVEAGKVSN
VFIGGKQLRL DKTYRFTIPS YNAAGGDGYP KVSGHSGYVN TGFVDAEVLK EFLETNSPID
VNEFAPRGEI VYK
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